STRINGSTRING
I79_009809 I79_009809 Hhex Hhex I79_026077 I79_026077 Ddx19b Ddx19b I79_015652 I79_015652 Pcid2 Pcid2 I79_013417 I79_013417 I79_013015 I79_013015 Iws1 Iws1 Grtp1 Grtp1 Nup93 Nup93 I79_010456 I79_010456 I79_009734 I79_009734 I79_009358 I79_009358 ENY2 ENY2 Mcm3ap Mcm3ap Nup133 Nup133 Sema5b Sema5b I79_022365 I79_022365 I79_021570 I79_021570 Gle1 Gle1 I79_019984 I79_019984 I79_019983 I79_019983 Poldip3 Poldip3 I79_015655 I79_015655 Nxf1 Nxf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_009809Uncharacterized protein. (136 aa)
HhexHematopoietically-expressed homeobox protein Hhex. (98 aa)
I79_026077ATP-dependent RNA helicase DDX19A. (113 aa)
Ddx19bATP-dependent RNA helicase DDX19B. (479 aa)
I79_015652Nuclear RNA export factor 1. (481 aa)
Pcid2PCI domain-containing protein 2. (123 aa)
I79_013417Polyadenylate-binding protein 2. (244 aa)
I79_013015Zinc finger CCCH domain-containing protein 11A. (522 aa)
Iws1Protein IWS1-like. (807 aa)
Grtp1PCI domain-containing protein 2. (661 aa)
Nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (780 aa)
I79_010456Uncharacterized protein C12orf50-like. (291 aa)
I79_009734SAP domain-containing ribonucleoprotein. (106 aa)
I79_009358ATP-dependent RNA helicase DDX25. (441 aa)
ENY2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] (131 aa)
Mcm3ap80 kDa MCM3-associated protein. (1979 aa)
Nup133Nuclear pore complex protein Nup133. (632 aa)
Sema5bNucleoporin GLE1. (167 aa)
I79_022365Polymerase delta-interacting protein 3. (108 aa)
I79_021570Nuclear RNA export factor 2. (470 aa)
Gle1Nucleoporin GLE1. (679 aa)
I79_019984THO complex subunit 2. (630 aa)
I79_019983THO complex subunit 2. (140 aa)
Poldip3Polymerase delta-interacting protein 3. (373 aa)
I79_015655Nuclear RNA export factor 2. (620 aa)
Nxf1Nuclear RNA export factor 1-like protein. (621 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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