STRINGSTRING
I79_026218 I79_026218 Scn2b Scn2b Scn4b Scn4b Prss41 Prss41 I79_022301 I79_022301 I79_019421 I79_019421 I79_018077 I79_018077 H671_7g18420 H671_7g18420 CgPICR_015426 CgPICR_015426 I79_013769 I79_013769 Tmprss3 Tmprss3 Ywhah Ywhah Fgf14 Fgf14 Gpld1 Gpld1 I79_000157 I79_000157 Fgf12 Fgf12 Pcsk9 Pcsk9 Nos1 Nos1 Gpd1l Gpd1l I79_002707 I79_002707 Cav3 Cav3 I79_007033 I79_007033 I79_007478 I79_007478 Fgf13 Fgf13 CgPICR_019784 CgPICR_019784 Commd1 Commd1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_026218Calcium/calmodulin-dependent protein kinase type II delta chain. (64 aa)
Scn2bSodium channel subunit beta-2. (186 aa)
Scn4bSodium channel subunit beta-4. (202 aa)
Prss41Serine protease 41-like protein; Belongs to the peptidase S1 family. (305 aa)
I79_022301Calcium/calmodulin-dependent protein kinase type II delta chain. (225 aa)
I79_019421Prostasin; Belongs to the peptidase S1 family. (336 aa)
I79_018077Sodium channel subunit beta-3. (174 aa)
H671_7g18420Serine protease 30-like protein; Belongs to the peptidase S1 family. (302 aa)
CgPICR_015426Ran guanine nucleotide release factor. (154 aa)
I79_013769E3 ubiquitin-protein ligase NEDD4-like. (182 aa)
Tmprss3Transmembrane protease, serine 3; Belongs to the peptidase S1 family. (470 aa)
Ywhah14-3-3 protein eta; Belongs to the 14-3-3 family. (236 aa)
Fgf14Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (170 aa)
Gpld1Phosphatidylinositol-glycan-specific phospholipase D. (778 aa)
I79_000157E3 ubiquitin-protein ligase NEDD4. (1032 aa)
Fgf12Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (165 aa)
Pcsk9Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family. (691 aa)
Nos1Nitric oxide synthase; Produces nitric oxide (NO). (1413 aa)
Gpd1lGlycerol-3-phosphate dehydrogenase [NAD(+)]. (312 aa)
I79_002707Ran guanine nucleotide release factor. (163 aa)
Cav3Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
I79_007033Tyrosine-protein phosphatase non-receptor type 3. (798 aa)
I79_007478Alpha-1-syntrophin. (344 aa)
Fgf13Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (117 aa)
CgPICR_019784Glycerol-3-phosphate dehydrogenase 1-like protein. (133 aa)
Commd1COMM domain-containing protein 1. (188 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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