STRINGSTRING
Plxna4 Plxna4 Sema3a Sema3a Ephb2 Ephb2 I79_009364 I79_009364 I79_009030 I79_009030 Nrp2 Nrp2 Hoxa3 Hoxa3 Hoxa1 Hoxa1 Ephb1 Ephb1 Chrnb2 Chrnb2 Adarb1 Adarb1 Sema3f Sema3f Hoxb1 Hoxb1 Hoxb2 Hoxb2 I79_005672 I79_005672 I79_005534 I79_005534 Tifab Tifab Neurog1 Neurog1 Egr2 Egr2 I79_021503 I79_021503 I79_021038 I79_021038 Plxna3 Plxna3 I79_021155 I79_021155 Kcna2 Kcna2 Six1 Six1 I79_022161 I79_022161 I79_018218 I79_018218 Dmd Dmd Nrp1 Nrp1 Gli3 Gli3 Mafb Mafb I79_012231 I79_012231
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Plxna4Plexin-A4. (1078 aa)
Sema3aSemaphorin-3A-like protein; Belongs to the semaphorin family. (758 aa)
Ephb2Ephrin type-B receptor 2. (1018 aa)
I79_009364Transcription factor AP-2 alpha. (411 aa)
I79_009030T-box transcription factor TBX1. (293 aa)
Nrp2Neuropilin; Belongs to the neuropilin family. (909 aa)
Hoxa3Homeobox protein Hox-A3. (286 aa)
Hoxa1Homeobox protein Hox-A1. (334 aa)
Ephb1Ephrin type-B receptor 1. (737 aa)
Chrnb2Neuronal acetylcholine receptor subunit beta-2. (495 aa)
Adarb1Double-stranded RNA-specific editase 1. (701 aa)
Sema3fSemaphorin-3F; Belongs to the semaphorin family. (785 aa)
Hoxb1Homeobox protein Hox-B1. (297 aa)
Hoxb2Homeobox protein Hox-B2. (407 aa)
I79_005672Homeobox protein Hox-B3. (174 aa)
I79_005534Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1145 aa)
TifabTRAF-interacting protein with FHA domain-containing protein B. (191 aa)
Neurog1Neurogenin-1. (241 aa)
Egr2Early growth response protein 2. (410 aa)
I79_021503Paired mesoderm homeobox protein 2A. (139 aa)
I79_021038Plexin-A3. (334 aa)
Plxna3Plexin-A3. (656 aa)
I79_021155Paired box protein Pax-2. (503 aa)
Kcna2Potassium voltage-gated channel subfamily A member 2; Belongs to the potassium channel family. (434 aa)
Six1Homeobox protein SIX1. (284 aa)
I79_022161Dystrophin. (655 aa)
I79_018218Plexin-A4. (498 aa)
DmdDystrophin. (617 aa)
Nrp1Neuropilin; Belongs to the neuropilin family. (923 aa)
Gli3Zinc finger protein GLI3. (1582 aa)
MafbTranscription factor MafB. (317 aa)
I79_012231Plexin-A4. (332 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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