STRINGSTRING
I79_020166 I79_020166 Znf423 Znf423 Rora Rora Atf5 Atf5 I79_006225 I79_006225 Psmg1 Psmg1 Gbx2 Gbx2 Rere Rere
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_020166Arginine-glutamic acid dipeptide repeats protein. (1473 aa)
Znf423Zinc finger protein 423. (1224 aa)
RoraNuclear receptor ROR-alpha. (959 aa)
Atf5Cyclic AMP-dependent transcription factor ATF-5. (279 aa)
I79_006225Sonic hedgehog protein. (226 aa)
Psmg1Proteasome assembly chaperone 1; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg2. (289 aa)
Gbx2Homeobox protein GBX-2. (222 aa)
RereArginine-glutamic acid dipeptide repeats protein. (173 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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