STRINGSTRING
Notch2 Notch2 ilk ilk Msx1 Msx1 Bmpr2 Bmpr2 H671_1g2300 H671_1g2300 Msx2 Msx2 Fkbp8 Fkbp8 Znf423 Znf423 Cdh5 Cdh5 I79_006254 I79_006254 Smad2 Smad2 Rnf165 Rnf165 I79_007514 I79_007514 Pelo Pelo Tgfbr3 Tgfbr3 Neo1 Neo1 I79_009708 I79_009708 I79_011565 I79_011565 I79_013621 I79_013621 Smad4 Smad4 Ube2o Ube2o I79_015223 I79_015223 I79_015503 I79_015503 I79_015880 I79_015880 Twsg1 Twsg1 Vsir Vsir I79_017780 I79_017780 I79_017912 I79_017912 Tbx20 Tbx20 I79_018746 I79_018746 Acvrl1 Acvrl1 Rbpj Rbpj I79_022034 I79_022034
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Notch2Neurogenic locus notch-like protein 2. (1521 aa)
ilkIntegrin-linked protein kinase. (452 aa)
Msx1Homeobox protein MSX-1. (261 aa)
Bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
H671_1g2300Kielin/chordin-like protein. (1223 aa)
Msx2Homeobox protein MSX-2. (267 aa)
Fkbp8Peptidylprolyl isomerase. (405 aa)
Znf423Zinc finger protein 423. (1224 aa)
Cdh5Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. (763 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
Smad2Mothers against decapentaplegic homolog. (467 aa)
Rnf165RING finger protein 165. (280 aa)
I79_007514Growth/differentiation factor 5. (253 aa)
PeloProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
Tgfbr3TGF-beta receptor type III. (849 aa)
Neo1Neogenin. (1405 aa)
I79_009708Glypican-3; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (332 aa)
I79_011565Crumbs-like 2. (1065 aa)
I79_013621Signal peptide, CUB and EGF-like domain-containing protein 3. (855 aa)
Smad4Mothers against decapentaplegic-like 4. (259 aa)
Ube2oUbiquitin-conjugating enzyme E2 O. (1138 aa)
I79_015223Neurogenic locus notch-like protein 2. (248 aa)
I79_015503Transcription factor HES-1. (92 aa)
I79_015880F-box only protein 37. (399 aa)
Twsg1Twisted gastrulation protein-like 1. (222 aa)
VsirPlatelet receptor Gi24. (271 aa)
I79_017780Extracellular sulfatase Sulf-1. (787 aa)
I79_017912Nuclear mitotic apparatus protein 1; Belongs to the transient receptor (TC 1.A.4) family. (3026 aa)
Tbx20T-box transcription factor TBX20. (445 aa)
I79_018746UPF0577 protein KIAA1324-like-like. (709 aa)
Acvrl1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (776 aa)
RbpjRecombining binding protein suppressor of hairless-like protein. (486 aa)
I79_022034Vascular endothelial growth factor receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1150 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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