STRINGSTRING
Ddx39b Ddx39b I79_026256 I79_026256 I79_025858 I79_025858 I79_025672 I79_025672 I79_025570 I79_025570 I79_024025 I79_024025 I79_022499 I79_022499 Prpf31 Prpf31 I79_014984 I79_014984 Prpf4 Prpf4 I79_009465 I79_009465
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ddx39bSpliceosome RNA helicase BAT1. (288 aa)
I79_026256Spliceosome RNA helicase Bat1. (103 aa)
I79_025858Spliceosome RNA helicase BAT1. (66 aa)
I79_025672Spliceosome RNA helicase BAT1. (155 aa)
I79_025570Spliceosome RNA helicase Bat1. (229 aa)
I79_024025NHP2-like protein 1. (73 aa)
I79_022499Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (88 aa)
Prpf31U4/U6 small nuclear ribonucleoprotein Prp31. (441 aa)
I79_014984Squamous cell carcinoma antigen recognized by T-cells 3. (803 aa)
Prpf4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
I79_009465Gem-associated protein 5. (1001 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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