STRINGSTRING
Tbx3 Tbx3 I79_000973 I79_000973 Tp63 Tp63 I79_025679 I79_025679 Foxp1 Foxp1 Ccnd1 Ccnd1 I79_025680 I79_025680 Jag1 Jag1 I79_024203 I79_024203 I79_024202 I79_024202 I79_023436 I79_023436 I79_023429 I79_023429 Acvrl1 Acvrl1 Foxj2 Foxj2 Xdh Xdh Gdf3 Gdf3 Foxp4 Foxp4 Gpsm3 Gpsm3 I79_015503 I79_015503 Spry1 Spry1 Dll1 Dll1 Zeb1 Zeb1 I79_011377 I79_011377 S1pr3 S1pr3 Spred1 Spred1 Nkx6-3 Nkx6-3 Id1 Id1 Fst Fst Osr1 Osr1 Srsf6 Srsf6 Hoxa7 Hoxa7 Cav1 Cav1 Ctnnb1 Ctnnb1 Mmp9 Mmp9 I79_006675 I79_006675 Tgfbr1 Tgfbr1 Nodal Nodal Sall1 Sall1 Msx2 Msx2 Spred2 Spred2 Smo Smo Ezh2 Ezh2 Vhl Vhl Six2 Six2 I79_001484 I79_001484
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tbx3T-box transcription factor TBX3. (709 aa)
I79_000973Transcription factor SOX-10. (360 aa)
Tp63Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. (642 aa)
I79_025679Forkhead box protein P4. (346 aa)
Foxp1Forkhead box protein P1. (696 aa)
Ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (295 aa)
I79_025680Forkhead box protein P4. (206 aa)
Jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1186 aa)
I79_024203Sal-like protein 1. (121 aa)
I79_024202Sal-like protein 1. (825 aa)
I79_023436Forkhead box protein P4. (104 aa)
I79_023429Forkhead box protein P4. (631 aa)
Acvrl1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (776 aa)
Foxj2Forkhead box protein J2. (573 aa)
XdhXanthine dehydrogenase/oxidase. (1332 aa)
Gdf3Growth/differentiation factor 3. (361 aa)
Foxp4Forkhead box protein P4. (685 aa)
Gpsm3Neurogenic locus notch-like protein 4. (1797 aa)
I79_015503Transcription factor HES-1. (92 aa)
Spry1Protein sprouty-like 1. (313 aa)
Dll1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (741 aa)
Zeb1Zinc finger E-box-binding homeobox 1. (1078 aa)
I79_011377Grainyhead-like protein 2-like. (522 aa)
S1pr3Sphingosine 1-phosphate receptor 3; Belongs to the G-protein coupled receptor 1 family. (376 aa)
Spred1Sprouty-related, EVH1 domain-containing protein 1. (370 aa)
Nkx6-3Homeobox protein Nkx-6.3. (262 aa)
Id1DNA-binding protein inhibitor ID-1. (157 aa)
FstFollistatin. (316 aa)
Osr1Protein odd-skipped-related 1. (266 aa)
Srsf6Splicing factor, arginine/serine-rich 6. (210 aa)
Hoxa7Homeobox protein Hox-A7. (112 aa)
Cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (147 aa)
Ctnnb1Catenin beta-1. (781 aa)
Mmp9Matrix metalloproteinase-9. (710 aa)
I79_006675Secreted frizzled-related protein 3. (286 aa)
Tgfbr1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (401 aa)
NodalNodal. (309 aa)
Sall1Sal-like protein 1. (1294 aa)
Msx2Homeobox protein MSX-2. (267 aa)
Spred2Sprouty-related, EVH1 domain-containing protein 2. (415 aa)
SmoSmoothened-like; Belongs to the G-protein coupled receptor Fz/Smo family. (984 aa)
Ezh2Histone-lysine N-methyltransferase EZH2. (746 aa)
VhlVon Hippel-Lindau disease tumor suppressor. (134 aa)
Six2Homeobox protein SIX2. (299 aa)
I79_00148465 kDa Yes-associated protein. (257 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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