(6 nodes) Otic vesicle formation network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Npm3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (337 aa)
	Fgfr2	Fibroblast growth factor receptor 2. (659 aa)
	I79_019149	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (132 aa)
	Fgf3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (171 aa)
	Tcap	Telethonin. (167 aa)
	I79_000973	Transcription factor SOX-10. (360 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fgf3	Fgfr2	G3I4D7	G3IJY0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor 2.	0.984
Fgf3	I79_019149	G3I4D7	G3I6M4	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.666
Fgf3	Npm3	G3I4D7	G3HXU8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.666
Fgfr2	Fgf3	G3IJY0	G3I4D7	Fibroblast growth factor receptor 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.984
Fgfr2	I79_019149	G3IJY0	G3I6M4	Fibroblast growth factor receptor 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.898
Fgfr2	Npm3	G3IJY0	G3HXU8	Fibroblast growth factor receptor 2.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.898
I79_019149	Fgf3	G3I6M4	G3I4D7	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.666
I79_019149	Fgfr2	G3I6M4	G3IJY0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor 2.	0.898
Npm3	Fgf3	G3HXU8	G3I4D7	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.666
Npm3	Fgfr2	G3HXU8	G3IJY0	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor receptor 2.	0.898