STRINGSTRING
I79_008693 I79_008693 H1-1 H1-1 CgPICR_009866 CgPICR_009866 H1-6 H1-6 I79_008702 I79_008702 I79_008494 I79_008494 I79_007326 I79_007326 I79_007291 I79_007291 I79_006416 I79_006416 I79_006179 I79_006179 I79_006178 I79_006178 Mllt6 Mllt6 Mllt10 Mllt10 I79_005243 I79_005243 CgPICR_009991 CgPICR_009991 Rcc1 Rcc1 I79_003879 I79_003879 I79_003878 I79_003878 I79_002659 I79_002659 I79_002264 I79_002264 I79_000682 I79_000682 RNF168 RNF168 Dnttip1 Dnttip1 CgPICR_016421 CgPICR_016421 H1-5 H1-5 Pou5f1 Pou5f1 Ssrp1 Ssrp1 I79_013613 I79_013613 I79_013678 I79_013678 I79_014329 I79_014329 I79_014809 I79_014809 I79_014844 I79_014844 Actr6 Actr6 I79_015018 I79_015018 Pwwp3b Pwwp3b Supt16h Supt16h Rnf4 Rnf4 I79_016941 I79_016941 Hmgn5 Hmgn5 I79_017320 I79_017320 Hp1bp3 Hp1bp3 CgPICR_015008 CgPICR_015008 I79_018989 I79_018989 CgPICR_014164 CgPICR_014164 I79_020017 I79_020017 Actr10 Actr10 Rnf169 Rnf169 I79_021102 I79_021102 Supt6h Supt6h I79_023605 I79_023605 CgPICR_020888 CgPICR_020888 I79_023761 I79_023761 Noc2l Noc2l I79_024008 I79_024008 I79_024741 I79_024741 I79_011106 I79_011106 I79_010912 I79_010912 Cgas Cgas I79_009485 I79_009485 Pwwp3a Pwwp3a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_008693Histone H1.3. (207 aa)
H1-1Histone H1.1. (213 aa)
CgPICR_009866HIST1H1D. (212 aa)
H1-6Histone H1t. (150 aa)
I79_008702Histone H2A type 1; Belongs to the histone H2A family. (331 aa)
I79_008494Lethal(3)malignant brain tumor-like protein. (51 aa)
I79_007326POU domain, class 5, transcription factor 1. (221 aa)
I79_007291Zinc finger HIT domain-containing protein 1. (168 aa)
I79_006416Histone H3.3. (117 aa)
I79_006179Regulator of chromosome condensation. (421 aa)
I79_006178Regulator of chromosome condensation. (161 aa)
Mllt6Protein AF-17. (976 aa)
Mllt10Protein AF-10. (494 aa)
I79_005243High mobility group nucleosome-binding domain-containing protein 4. (62 aa)
CgPICR_009991High mobility group nucleosome-binding domain-containing protein 4. (90 aa)
Rcc1Regulator of chromosome condensation. (454 aa)
I79_003879Core histone macro-H2A.1. (155 aa)
I79_003878Histone H2A; Belongs to the histone H2A family. (242 aa)
I79_002659High mobility group protein HMGI-C. (103 aa)
I79_002264Histone H3.3 type 1. (138 aa)
I79_000682Histone H3.3. (136 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (564 aa)
Dnttip1Deoxynucleotidyltransferase terminal-interacting protein 1. (288 aa)
CgPICR_016421Zinc finger HIT domain-containing protein 1. (154 aa)
H1-5Histone H1.5. (222 aa)
Pou5f1POU domain protein. (358 aa)
Ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
I79_013613SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1166 aa)
I79_013678Putative oxidoreductase GLYR1. (462 aa)
I79_014329Histone H3.3. (102 aa)
I79_014809Histone H3.3 type 1. (89 aa)
I79_014844Histone H3.3. (140 aa)
Actr6Actin-related protein 6; Belongs to the actin family. (396 aa)
I79_015018Histone H1oo. (285 aa)
Pwwp3bMutated melanoma-associated antigen 1-like protein 1. (650 aa)
Supt16hFACT complex subunit SPT16. (927 aa)
Rnf4RING finger protein 4. (128 aa)
I79_016941Histone H3.3. (114 aa)
Hmgn5Nucleosome-binding protein 1. (297 aa)
I79_017320Poly [ADP-ribose] polymerase. (513 aa)
Hp1bp3Heterochromatin protein 1-binding protein 3. (561 aa)
CgPICR_015008Histone H1.0. (194 aa)
I79_018989High mobility group nucleosome-binding domain-containing protein 4. (83 aa)
CgPICR_014164High mobility group nucleosome-binding domain-containing protein 4. (90 aa)
I79_020017Nucleosome-binding protein 1. (109 aa)
Actr10Actin-related protein 10; Belongs to the actin family. (417 aa)
Rnf169RING finger protein 169. (537 aa)
I79_021102Histone H1.0. (178 aa)
Supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1725 aa)
I79_023605Histone H3.3. (136 aa)
CgPICR_020888Mutated melanoma-associated antigen 1-like protein 1. (691 aa)
I79_023761Nucleosome assembly protein 1-like 4; Belongs to the nucleosome assembly protein (NAP) family. (345 aa)
Noc2lPutative nucleolar complex protein 2 like protein. (748 aa)
I79_024008High mobility group nucleosome-binding domain-containing protein 4. (89 aa)
I79_024741High mobility group nucleosome-binding domain-containing protein 4. (101 aa)
I79_011106Non-histone chromosomal protein HMG-17. (109 aa)
I79_010912Spermatid-specific linker histone H1-like protein. (174 aa)
CgasUncharacterized protein C6orf150. (512 aa)
I79_009485Non-histone chromosomal protein HMG-14. (65 aa)
Pwwp3aMutated melanoma-associated antigen 1. (691 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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