(45 nodes) trans-Golgi network membrane network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_023885	Myosin-Ib; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (863 aa)
	I79_024413	Putative phospholipid-transporting ATPase IIA. (781 aa)
	I79_025546	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (340 aa)
	Mmp24	Matrix metalloproteinase-24. (140 aa)
	I79_020466	Neuron-specific protein family member 2. (123 aa)
	I79_000271	Calcium-transporting ATPase type 2C member 2; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (875 aa)
	Kif13a	Kinesin-like protein KIF13A. (326 aa)
	I79_001358	Ras-related protein Rab-44. (166 aa)
	Cracr2a	EF-hand calcium-binding domain-containing protein 4B. (567 aa)
	Llgl1	Lethal(2) giant larvae protein-like 1. (754 aa)
	Nsg1	Neuron-specific protein family member 1. (185 aa)
	Gnas	Guanine nucleotide-binding protein G(S) subunit alpha isoforms XLas. (335 aa)
	I79_002219	Neuroendocrine secretory protein 55. (295 aa)
	Tepsin	Uncharacterized protein C17orf56-like. (504 aa)
	Aftph	Aftiphilin. (902 aa)
	Pld4	Phospholipase D4. (297 aa)
	Clba1	Uncharacterized protein C14orf79-like. (241 aa)
	Lgr5	Leucine-rich repeat-containing G-protein coupled receptor 5. (555 aa)
	Bok	Bcl-2-related ovarian killer protein. (213 aa)
	Stx6	Syntaxin-6; Belongs to the syntaxin family. (262 aa)
	Ap1g1	AP-1 complex subunit gamma. (822 aa)
	I79_007509	Matrix metalloproteinase-24. (552 aa)
	Baiap3	BAI1-associated protein 3. (1140 aa)
	Scamp3	Secretory carrier-associated membrane protein. (351 aa)
	Bpnt2	Inositol monophosphatase 3. (167 aa)
	Scamp4	Secretory carrier-associated membrane protein. (155 aa)
	Tmem79	Transmembrane protein 79. (395 aa)
	Atp7b	Copper-transporting ATPase 2. (796 aa)
	I79_010077	Copper-transporting ATPase 2. (660 aa)
	Marchf1	E3 ubiquitin-protein ligase MARCH1. (365 aa)
	Atp7a	Copper-transporting ATPase 1. (1457 aa)
	I79_012516	Calcium-binding protein 7. (174 aa)
	I79_012691	CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase; Belongs to the glycosyltransferase 29 family. (208 aa)
	Arfip1	Arfaptin-1. (373 aa)
	I79_013668	Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1. (809 aa)
	I79_014480	Vacuolar protein sorting-associated protein 13B. (2571 aa)
	I79_014481	Vacuolar protein sorting-associated protein 13B. (617 aa)
	I79_014482	Vacuolar protein sorting-associated protein 13B. (239 aa)
	Rab31	Ras-related protein Rab-31. (122 aa)
	Fut9	Alpha-(1,3)-fucosyltransferase. (359 aa)
	Pick1	PRKCA-binding protein. (416 aa)
	Scamp5	Secretory carrier-associated membrane protein. (235 aa)
	Tmem165	GDT1 family protein. (164 aa)
	Arfip2	Arfaptin-2-like protein. (341 aa)
	Scamp2	Secretory carrier-associated membrane protein. (286 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arfip1	Arfip2	G3HQA3	G3IDF4	Arfaptin-1.	Arfaptin-2-like protein.	0.499
Arfip2	Arfip1	G3IDF4	G3HQA3	Arfaptin-2-like protein.	Arfaptin-1.	0.499
Atp7a	Atp7b	G3HNY2	G3HHI9	Copper-transporting ATPase 1.	Copper-transporting ATPase 2.	0.903
Atp7a	Tmem165	G3HNY2	G3I9K2	Copper-transporting ATPase 1.	GDT1 family protein.	0.545
Atp7b	Atp7a	G3HHI9	G3HNY2	Copper-transporting ATPase 2.	Copper-transporting ATPase 1.	0.903
Atp7b	I79_010077	G3HHI9	G3HHJ0	Copper-transporting ATPase 2.	Copper-transporting ATPase 2.	0.921
Cracr2a	I79_001358	G3GUJ7	G3GUJ6	EF-hand calcium-binding domain-containing protein 4B.	Ras-related protein Rab-44.	0.894
I79_000271	Tmem165	G3GRX6	G3I9K2	Calcium-transporting ATPase type 2C member 2; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	GDT1 family protein.	0.489
I79_001358	Cracr2a	G3GUJ6	G3GUJ7	Ras-related protein Rab-44.	EF-hand calcium-binding domain-containing protein 4B.	0.894
I79_010077	Atp7b	G3HHJ0	G3HHI9	Copper-transporting ATPase 2.	Copper-transporting ATPase 2.	0.921
I79_014480	I79_014481	G3HU72	G3HU73	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.942
I79_014480	I79_014482	G3HU72	G3HU74	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.933
I79_014481	I79_014480	G3HU73	G3HU72	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.942
I79_014481	I79_014482	G3HU73	G3HU74	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.947
I79_014482	I79_014480	G3HU74	G3HU72	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.933
I79_014482	I79_014481	G3HU74	G3HU73	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.947
Tmem165	Atp7a	G3I9K2	G3HNY2	GDT1 family protein.	Copper-transporting ATPase 1.	0.545
Tmem165	I79_000271	G3I9K2	G3GRX6	GDT1 family protein.	Calcium-transporting ATPase type 2C member 2; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.	0.489