STRINGSTRING
Ihh Ihh I79_015484 I79_015484 I79_016874 I79_016874 Rag2 Rag2 Zc3h8 Zc3h8 Tmem131l Tmem131l I79_006225 I79_006225 I79_006254 I79_006254 Nfkbid Nfkbid Foxj1 Foxj1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IhhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (918 aa)
I79_015484C-type lectin domain family 4 member G. (399 aa)
I79_016874Cyclin-dependent kinase inhibitor 2A, isoforms 1/2. (92 aa)
Rag2V(D)J recombination-activating protein 2. (527 aa)
Zc3h8Zinc finger CCCH domain-containing protein 8. (306 aa)
Tmem131lTransmembrane protein 131-like. (1533 aa)
I79_006225Sonic hedgehog protein. (226 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
NfkbidNF-kappa-B inhibitor delta. (74 aa)
Foxj1Forkhead box protein J1. (421 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (22%) [HD]