(42 nodes) Endoplasmic reticulum-Golgi intermediate compartment membrane network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tm6sf2	Transmembrane 6 superfamily member 2. (650 aa)
	I79_016046	Putative N-acetyltransferase CML2. (87 aa)
	Tmed2	Transmembrane emp24 domain-containing protein 2. (116 aa)
	Sting1	Transmembrane protein 173. (315 aa)
	I79_014598	Protein ERGIC-53. (391 aa)
	I79_014482	Vacuolar protein sorting-associated protein 13B. (239 aa)
	I79_014481	Vacuolar protein sorting-associated protein 13B. (617 aa)
	I79_014480	Vacuolar protein sorting-associated protein 13B. (2571 aa)
	Tmed7	Transmembrane emp24 domain-containing protein 7. (136 aa)
	VMA21	Vacuolar ATPase assembly integral membrane protein VMA21; Required for the assembly of the V0 complex of the vacuolar ATPase (V-ATPase) in the endoplasmic reticulum. (101 aa)
	Surf4	Surfeit locus protein 4. (260 aa)
	Whamm	WASP-like-associated protein with actin, membranes and microtubules. (583 aa)
	Kdelr1	ER lumen protein retaining receptor 1. (61 aa)
	Golga2	Golgin subfamily A member 2. (567 aa)
	Atp6ap1	V-type proton ATPase subunit S1. (441 aa)
	I79_023329	Syntaxin-5. (144 aa)
	Stx5	Syntaxin-5; Belongs to the syntaxin family. (170 aa)
	Lman1l	Protein ERGIC-53-like. (503 aa)
	Ergic2	Endoplasmic reticulum-Golgi intermediate compartment protein 2. (132 aa)
	I79_026015	Surfeit locus protein 4. (78 aa)
	Piezo1	Protein FAM38A. (1724 aa)
	Lamp5	LAMP family protein C20orf103-like. (280 aa)
	Tmed3	Transmembrane emp24 domain-containing protein 3. (220 aa)
	Plpp3	Lipid phosphate phosphohydrolase 3. (312 aa)
	Cln8	Protein CLN8. (323 aa)
	Tmed9	Transmembrane emp24 domain-containing protein 9. (231 aa)
	Tmed1	Transmembrane emp24 domain-containing protein 1. (226 aa)
	Azin2	Antizyme inhibitor 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (459 aa)
	Crebrf	UPF0474 protein C5orf41-like. (745 aa)
	Ergic3	Endoplasmic reticulum-Golgi intermediate compartment protein 3. (383 aa)
	Tmed5	Transmembrane emp24 domain-containing protein 5. (230 aa)
	Tmed10	Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family. (130 aa)
	Robo1	Roundabout-like 1. (129 aa)
	I79_010159	Roundabout-like 1. (1362 aa)
	Plpp1	Lipid phosphate phosphohydrolase 1. (235 aa)
	Sppl3	Signal peptide peptidase-like 3. (347 aa)
	I79_012094	Metallophosphoesterase 1. (319 aa)
	Sec22b	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
	Stx17	Syntaxin-17; Belongs to the syntaxin family. (263 aa)
	Arpc5l	Golgin subfamily A member 2. (255 aa)
	I79_018271	Putative N-acetyltransferase CML2. (90 aa)
	I79_018272	Putative N-acetyltransferase CML1. (208 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arpc5l	I79_014598	G3HZI0	G3HUI7	Golgin subfamily A member 2.	Protein ERGIC-53.	0.618
Arpc5l	I79_023329	G3HZI0	G3IHN3	Golgin subfamily A member 2.	Syntaxin-5.	0.858
Arpc5l	Lman1l	G3HZI0	G3IIB9	Golgin subfamily A member 2.	Protein ERGIC-53-like.	0.414
Arpc5l	Sec22b	G3HZI0	G3HP80	Golgin subfamily A member 2.	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.	0.546
Arpc5l	Stx17	G3HZI0	G3HRG9	Golgin subfamily A member 2.	Syntaxin-17; Belongs to the syntaxin family.	0.494
Arpc5l	Stx5	G3HZI0	G3II26	Golgin subfamily A member 2.	Syntaxin-5; Belongs to the syntaxin family.	0.858
Arpc5l	Tmed10	G3HZI0	G3HFR3	Golgin subfamily A member 2.	Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family.	0.466
Arpc5l	Tmed2	G3HZI0	G3HX40	Golgin subfamily A member 2.	Transmembrane emp24 domain-containing protein 2.	0.515
Crebrf	I79_014598	G3H9Q1	G3HUI7	UPF0474 protein C5orf41-like.	Protein ERGIC-53.	0.526
Crebrf	I79_026015	G3H9Q1	G3IPT7	UPF0474 protein C5orf41-like.	Surfeit locus protein 4.	0.536
Crebrf	Surf4	G3H9Q1	G3I9S0	UPF0474 protein C5orf41-like.	Surfeit locus protein 4.	0.536
Ergic2	Ergic3	G3IP49	G3HAQ9	Endoplasmic reticulum-Golgi intermediate compartment protein 2.	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	0.987
Ergic2	Tmed10	G3IP49	G3HFR3	Endoplasmic reticulum-Golgi intermediate compartment protein 2.	Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family.	0.510
Ergic3	Ergic2	G3HAQ9	G3IP49	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	Endoplasmic reticulum-Golgi intermediate compartment protein 2.	0.987
Ergic3	Tmed10	G3HAQ9	G3HFR3	Endoplasmic reticulum-Golgi intermediate compartment protein 3.	Transmembrane emp24 domain-containing protein 10; Belongs to the EMP24/GP25L family.	0.516
Golga2	I79_014598	G3IBJ2	G3HUI7	Golgin subfamily A member 2.	Protein ERGIC-53.	0.618
Golga2	I79_023329	G3IBJ2	G3IHN3	Golgin subfamily A member 2.	Syntaxin-5.	0.858
Golga2	Lman1l	G3IBJ2	G3IIB9	Golgin subfamily A member 2.	Protein ERGIC-53-like.	0.414
Golga2	Sec22b	G3IBJ2	G3HP80	Golgin subfamily A member 2.	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.	0.546
Golga2	Stx17	G3IBJ2	G3HRG9	Golgin subfamily A member 2.	Syntaxin-17; Belongs to the syntaxin family.	0.494