STRINGSTRING
Ar Ar Foxa1 Foxa1 I79_019286 I79_019286 I79_019113 I79_019113 Kmt2d Kmt2d Pagr1 Pagr1 Parp1 Parp1 Wbp2 Wbp2 Skp2 Skp2 Ncoa3 Ncoa3 Med1 Med1 I79_001484 I79_001484 I79_006792 I79_006792 Pak1 Pak1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ArAndrogen receptor. (517 aa)
Foxa1Hepatocyte nuclear factor 3-alpha. (434 aa)
I79_019286Androgen receptor. (295 aa)
I79_019113Histone-lysine N-methyltransferase MLL2. (1475 aa)
Kmt2dHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (4002 aa)
Pagr1PAXIP1-associated protein 1. (251 aa)
Parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (971 aa)
Wbp2WW domain-binding protein 2. (261 aa)
Skp2S-phase kinase-associated protein 2. (424 aa)
Ncoa3Nuclear receptor coactivator 3. (1211 aa)
Med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1581 aa)
I79_00148465 kDa Yes-associated protein. (257 aa)
I79_006792DUF1518 domain-containing protein. (200 aa)
Pak1Serine/threonine-protein kinase PAK 1. (325 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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