Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| I79_006462 | MED4 | G3H7W7 | G3H7W4 | cGMP-dependent protein kinase 1, beta isozyme; Belongs to the protein kinase superfamily. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.868 |
| I79_006462 | Prkcd | G3H7W7 | G3GUU6 | cGMP-dependent protein kinase 1, beta isozyme; Belongs to the protein kinase superfamily. | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | 0.416 |
| MED4 | I79_006462 | G3H7W4 | G3H7W7 | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | cGMP-dependent protein kinase 1, beta isozyme; Belongs to the protein kinase superfamily. | 0.868 |
| Map2k1 | Prkcd | G3INJ6 | G3GUU6 | Dual specificity mitogen-activated protein kinase kinase 1. | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | 0.918 |
| Prkcd | I79_006462 | G3GUU6 | G3H7W7 | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | cGMP-dependent protein kinase 1, beta isozyme; Belongs to the protein kinase superfamily. | 0.416 |
| Prkcd | Map2k1 | G3GUU6 | G3INJ6 | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | Dual specificity mitogen-activated protein kinase kinase 1. | 0.918 |
| Prkcd | Rdx | G3GUU6 | G3HFP1 | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | Radixin. | 0.445 |
| Rdx | Prkcd | G3HFP1 | G3GUU6 | Radixin. | Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. | 0.445 |