STRINGSTRING
I79_014999 I79_014999 Mmrn1 Mmrn1 Tnfsf11 Tnfsf11 Pdpn Pdpn Jak2 Jak2 Ccl5 Ccl5 Lgals1 Lgals1 I79_016276 I79_016276 Jak1 Jak1 I79_015109 I79_015109
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_014999Ankyrin-3. (1539 aa)
Mmrn1Multimerin-1. (802 aa)
Tnfsf11Tumor necrosis factor ligand superfamily member 11; Belongs to the tumor necrosis factor family. (199 aa)
PdpnPodoplanin. (55 aa)
Jak2Tyrosine-protein kinase. (1122 aa)
Ccl5C-C motif chemokine. (91 aa)
Lgals1Galectin. (135 aa)
I79_016276Urokinase plasminogen activator surface receptor. (186 aa)
Jak1Tyrosine-protein kinase. (1140 aa)
I79_015109Interleukin-6. (174 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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