STRINGSTRING
Rps6kb2 Rps6kb2 I79_017935 I79_017935 Rps9 Rps9 Eif2b5 Eif2b5 Eif4g1 Eif4g1 I79_017750 I79_017750 I79_017613 I79_017613 Ctif Ctif CgPICR_014750 CgPICR_014750 CgPICR_014751 CgPICR_014751 Barhl2 Barhl2 Gsk3a Gsk3a Pld1 Pld1 Poldip3 Poldip3 I79_016761 I79_016761 Ddx39b Ddx39b Tnf Tnf Gsap Gsap I79_016184 I79_016184 I79_016125 I79_016125 I79_015891 I79_015891 Dhx36 Dhx36 Picalm Picalm Pcbp1 Pcbp1 Larp4 Larp4 Mettl3 Mettl3 I79_015412 I79_015412 I79_003647 I79_003647 USP16 USP16 Syncrip Syncrip Mif4gd Mif4gd CgPICR_012648 CgPICR_012648 Rmnd1 Rmnd1 Mettl5 Mettl5 Prkcd Prkcd Rbms3 Rbms3 Ifngr1 Ifngr1 Rpusd3 Rpusd3 Ucn Ucn I79_003328 I79_003328 NAT10 NAT10 Nsun4 Nsun4 Sat2 Sat2 I79_002824 I79_002824 C1qbp C1qbp I79_015205 I79_015205 I79_015109 I79_015109 I79_015056 I79_015056 I79_014966 I79_014966 Sp1 Sp1 TARBP2 TARBP2 Fxr1 Fxr1 Eif4a3 Eif4a3 Enpp7 Enpp7 I79_013999 I79_013999 Eef2 Eef2 Trmt10c Trmt10c I79_013537 I79_013537 I79_013513 I79_013513 Abcf1 Abcf1 Uhmk1 Uhmk1 Nras Nras Fastkd3 Fastkd3 Ythdf3 Ythdf3 Eif2s3 Eif2s3 CgPICR_018825 CgPICR_018825 Eif5a Eif5a Larp4b Larp4b Dnajc3 Dnajc3 Apoe Apoe I79_012338 I79_012338 I79_012336 I79_012336 I79_012334 I79_012334 Clu Clu Rbm3 Rbm3 I79_012168 I79_012168 Paip1 Paip1 I79_011974 I79_011974 I79_011732 I79_011732 Rcc1l Rcc1l Abcg1 Abcg1 I79_011482 I79_011482 I79_011333 I79_011333 Csde1 Csde1 RPS3A RPS3A Igf2bp1 Igf2bp1 I79_010839 I79_010839 I79_010806 I79_010806 Rps6kb1 Rps6kb1 I79_010640 I79_010640 Mrps27 Mrps27 Cnbp Cnbp Secisbp2 Secisbp2 DHX29 DHX29 Thbs1 Thbs1 I79_010207 I79_010207 Vim Vim Jmjd4 Jmjd4 I79_009995 I79_009995 Ythdf1 Ythdf1 Serp1 Serp1 I79_009500 I79_009500 Larp1 Larp1 I79_009367 I79_009367 Rpusd4 Rpusd4 Cirbp Cirbp Nck1 Nck1 I79_008911 I79_008911 Fastkd2 Fastkd2 Tent4a Tent4a Efna1 Efna1 I79_007990 I79_007990 Tob1 Tob1 I79_007738 I79_007738 CgPICR_006483 CgPICR_006483 I79_007624 I79_007624 I79_007532 I79_007532 EIF6 EIF6 Cdk5rap1 Cdk5rap1 Lrrtm3 Lrrtm3 Nsun5 Nsun5 Pink1 Pink1 Niban1 Niban1 I79_007042 I79_007042 Khdrbs1 Khdrbs1 Pcif1 Pcif1 I79_006732 I79_006732 Hnrnpu Hnrnpu I79_006308 I79_006308 I79_006249 I79_006249 I79_006195 I79_006195 I79_006194 I79_006194 I79_006157 I79_006157 I79_005936 I79_005936 Erbb2 Erbb2 Nck2 Nck2 I79_005612 I79_005612 Nod2 Nod2 I79_005382 I79_005382 I79_005279 I79_005279 I79_005234 I79_005234 Larp6 Larp6 Pkm Pkm Ptafr Ptafr Ythdf2 Ythdf2 Nfe2l2 Nfe2l2 I79_026256 I79_026256 I79_025858 I79_025858 I79_025778 I79_025778 Smpd3 Smpd3 I79_025672 I79_025672 I79_025653 I79_025653 I79_025570 I79_025570 I79_025301 I79_025301 I79_025236 I79_025236 GUF1 GUF1 I79_024406 I79_024406 Pla2g6 Pla2g6 Mettl14 Mettl14 Abca2 Abca2 I79_023874 I79_023874 I79_023387 I79_023387 Upf3b Upf3b Mief1 Mief1 I79_023040 I79_023040 I79_022677 I79_022677 I79_022371 I79_022371 I79_022365 I79_022365 Ybx1 Ybx1 Mtor Mtor I79_021949 I79_021949 Rxra Rxra I79_021911 I79_021911 I79_021865 I79_021865 Rela Rela Cpeb1 Cpeb1 H671_xg20331 H671_xg20331 I79_021360 I79_021360 Habp4 Habp4 I79_020958 I79_020958 I79_020755 I79_020755 Akap6 Akap6 I79_020424 I79_020424 I79_020401 I79_020401 Eif5a2 Eif5a2 Krt17 Krt17 Zcchc4 Zcchc4 H671_20952 H671_20952 Hnrnpd Hnrnpd Polr2d Polr2d Prr16 Prr16 I79_018631 I79_018631 CgPICR_009543 CgPICR_009543 Mapk3 Mapk3 I79_018306 I79_018306 Eif4g3 Eif4g3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rps6kb2Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (485 aa)
I79_017935Lin-28-like A. (169 aa)
Rps940S ribosomal protein S9. (130 aa)
Eif2b5Translation initiation factor eIF-2B subunit epsilon. (716 aa)
Eif4g1Eukaryotic translation initiation factor 4 gamma 1. (1590 aa)
I79_017750Plexin-B2. (1753 aa)
I79_017613DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3486 aa)
CtifCBP80/20-dependent translation initiation factor. (73 aa)
CgPICR_014750Eukaryotic initiation factor 4A-III. (115 aa)
CgPICR_014751Eukaryotic initiation factor 4A-III. (250 aa)
Barhl2BarH-like 2 homeobox protein. (410 aa)
Gsk3aGlycogen synthase kinase-3 alpha. (653 aa)
Pld1Phospholipase D1. (175 aa)
Poldip3Polymerase delta-interacting protein 3. (373 aa)
I79_016761Putative UDP-sugar transporter protein SLC35A4. (113 aa)
Ddx39bSpliceosome RNA helicase BAT1. (288 aa)
TnfTumor necrosis factor; Belongs to the tumor necrosis factor family. (234 aa)
GsapProtein pigeon-like. (207 aa)
I79_016184Protein FAM46B. (352 aa)
I79_016125Pyruvate kinase isozymes M1/M2. (110 aa)
I79_015891Eukaryotic translation initiation factor 5A. (66 aa)
Dhx36Putative ATP-dependent RNA helicase DHX36. (922 aa)
PicalmPhosphatidylinositol-binding clathrin assembly protein. (604 aa)
Pcbp1Poly(RC)-binding protein 1. (356 aa)
Larp4La-related protein 4. (188 aa)
Mettl3N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family. (580 aa)
I79_015412Plexin-B2. (376 aa)
I79_00364740S ribosomal protein S3a. (93 aa)
USP16Ubiquitin carboxyl-terminal hydrolase 16; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. (823 aa)
SyncripHeterogeneous nuclear ribonucleoprotein Q. (562 aa)
Mif4gdMIF4G domain-containing protein. (222 aa)
CgPICR_012648Partner of Y14 and mago. (197 aa)
Rmnd1Required for meiotic nuclear division protein 1-like. (351 aa)
Mettl5Methyltransferase-like protein 5. (209 aa)
PrkcdNon-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (437 aa)
Rbms3RNA-binding motif, single-stranded-interacting protein 3. (381 aa)
Ifngr1Interferon-gamma receptor alpha chain. (471 aa)
Rpusd3RNA pseudouridylate synthase domain-containing protein 3. (362 aa)
UcnUrocortin. (122 aa)
I79_003328Regulator of nonsense transcripts 3A. (414 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1025 aa)
Nsun4Putative methyltransferase NSUN4; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (381 aa)
Sat2Fragile X mental retardation syndrome-related protein 2. (690 aa)
I79_002824DNA-directed RNA polymerase II subunit RPB7. (69 aa)
C1qbpComplement component 1 Q subcomponent-binding protein, mitochondrial. (209 aa)
I79_015205Cell division protein kinase 4; Belongs to the protein kinase superfamily. (367 aa)
I79_015109Interleukin-6. (174 aa)
I79_015056Neuronal acetylcholine receptor subunit alpha-7. (412 aa)
I79_01496660S ribosomal protein L5. (296 aa)
Sp1Transcription factor Sp1. (778 aa)
TARBP2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (365 aa)
Fxr1Fragile X mental retardation syndrome-related protein 1. (72 aa)
Eif4a3Eukaryotic initiation factor 4A-III. (279 aa)
Enpp7Ectonucleotide pyrophosphatase/phosphodiesterase family member 7. (809 aa)
I79_013999Cytochrome P450 1B1; Belongs to the cytochrome P450 family. (328 aa)
Eef2Elongation factor 2. (872 aa)
Trmt10cMitochondrial ribonuclease P protein 1. (525 aa)
I79_013537ELAV-like protein; Belongs to the RRM elav family. (335 aa)
I79_013513Partner of Y14 and mago. (221 aa)
Abcf1ATP-binding cassette sub-family F member 1. (581 aa)
Uhmk1Serine/threonine-protein kinase Kist. (375 aa)
NrasCold shock domain-containing protein E1. (451 aa)
Fastkd3FAST kinase domain-containing protein 3. (660 aa)
Ythdf3YTH domain family protein 3. (588 aa)
Eif2s3Eukaryotic translation initiation factor 2 subunit 3. (472 aa)
CgPICR_018825Cell division protein kinase 4. (121 aa)
Eif5aEukaryotic translation initiation factor 5A-1. (76 aa)
Larp4bLa-related protein 4B. (615 aa)
Dnajc3DnaJ-like subfamily C member 3. (502 aa)
ApoeApolipoprotein E. (313 aa)
I79_01233840S ribosomal protein S27. (52 aa)
I79_012336Protein tyrosine kinase 2 beta. (53 aa)
I79_01233460S ribosomal protein L5. (297 aa)
CluClusterin; Functions as extracellular chaperone that prevents aggregation of non native proteins. Prevents stress-induced aggregation of blood plasma proteins. (447 aa)
Rbm3Putative RNA-binding protein 3. (169 aa)
I79_012168Fragile X mental retardation 1 protein. (560 aa)
Paip1Polyadenylate-binding protein-interacting protein 1. (366 aa)
I79_011974La-related protein 1B. (418 aa)
I79_011732Coiled-coil domain-containing protein 56. (108 aa)
Rcc1lWilliams-Beuren syndrome chromosomal region 16 protein-like. (331 aa)
Abcg1ATP-binding cassette sub-family G member 1. (647 aa)
I79_01148260S ribosomal protein L5. (211 aa)
I79_011333Sphingomyelin phosphodiesterase 3. (410 aa)
Csde1Cold shock domain-containing protein E1. (95 aa)
RPS3A40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
Igf2bp1Insulin-like growth factor 2 mRNA-binding protein 1. (552 aa)
I79_010839Eukaryotic translation initiation factor 2-alpha kinase 3. (783 aa)
I79_010806Cold shock domain-containing protein E1. (255 aa)
Rps6kb1Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily. (502 aa)
I79_010640La-related protein 4. (510 aa)
Mrps2728S ribosomal protein S27, mitochondrial. (415 aa)
CnbpCellular nucleic acid-binding protein. (177 aa)
Secisbp2Selenocysteine insertion sequence-binding protein 2. (855 aa)
DHX29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1371 aa)
Thbs1Thrombospondin-1. (533 aa)
I79_010207Eukaryotic translation initiation factor 2-alpha kinase 4. (1513 aa)
VimVimentin; Belongs to the intermediate filament family. (466 aa)
Jmjd4JmjC domain-containing protein 4. (163 aa)
I79_00999560S ribosomal protein L5-A. (178 aa)
Ythdf1YTH domain family protein 1. (509 aa)
Serp1Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (66 aa)
I79_009500Mitogen-activated protein kinase 1. (68 aa)
Larp1La-related protein 1. (571 aa)
I79_00936760S ribosomal protein L5. (147 aa)
Rpusd4RNA pseudouridylate synthase domain-containing protein 4. (377 aa)
CirbpCold-inducible RNA-binding protein. (184 aa)
Nck1Cytoplasmic protein NCK1. (602 aa)
I79_00891160S ribosomal protein L5. (54 aa)
Fastkd2FAST kinase domain-containing protein 2. (688 aa)
Tent4aDNA polymerase sigma. (534 aa)
Efna1Ephrin-A1; Belongs to the ephrin family. (205 aa)
I79_00799040S ribosomal protein S9. (87 aa)
Tob1Protein Tob1-like protein. (350 aa)
I79_007738Pyruvate kinase isozymes M1/M2. (120 aa)
CgPICR_006483Eukaryotic translation initiation factor 5A-1. (128 aa)
I79_007624Rho-associated protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1071 aa)
I79_007532Elongation factor 2. (52 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (245 aa)
Cdk5rap1CDK5 regulatory subunit-associated protein 1. (591 aa)
Lrrtm3Leucine-rich repeat transmembrane neuronal protein 3. (488 aa)
Nsun5Putative methyltransferase NSUN5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (153 aa)
Pink1Serine/threonine-protein kinase PINK1, mitochondrial. (451 aa)
Niban1Protein Niban. (930 aa)
I79_00704240S ribosomal protein S3a. (95 aa)
Khdrbs1KH domain-containing, RNA-binding, signal transduction-associated protein 1. (443 aa)
Pcif1Phosphorylated CTD-interacting factor 1. (826 aa)
I79_006732KH domain-containing, RNA-binding, signal transduction-associated protein 1. (195 aa)
HnrnpuHeterogeneous nuclear ribonucleoprotein U. (512 aa)
I79_00630860S ribosomal protein L5. (179 aa)
I79_006249Protein Smaug-like 1. (623 aa)
I79_006195Regulator of nonsense transcripts 3B. (125 aa)
I79_006194Regulator of nonsense transcripts 3B. (154 aa)
I79_00615760S ribosomal protein L5. (176 aa)
I79_005936Phospholipase D1. (688 aa)
Erbb2Receptor protein-tyrosine kinase. (1256 aa)
Nck2Cytoplasmic protein. (380 aa)
I79_005612PAP-associated domain-containing protein 5. (382 aa)
Nod2Nucleotide-binding oligomerization domain-containing protein 2. (989 aa)
I79_00538240S ribosomal protein S27. (52 aa)
I79_00527960S ribosomal protein L5. (176 aa)
I79_005234Putative UDP-sugar transporter protein SLC35A4. (114 aa)
Larp6La-related protein 6. (492 aa)
PkmPyruvate kinase; Belongs to the pyruvate kinase family. (472 aa)
PtafrPlatelet-activating factor receptor; Belongs to the G-protein coupled receptor 1 family. (341 aa)
Ythdf2YTH domain family protein 2. (529 aa)
Nfe2l2Nuclear factor erythroid 2-related factor 2. (588 aa)
I79_026256Spliceosome RNA helicase Bat1. (103 aa)
I79_025858Spliceosome RNA helicase BAT1. (66 aa)
I79_025778Plexin-B2. (340 aa)
Smpd3Sphingomyelin phosphodiesterase 3. (446 aa)
I79_025672Spliceosome RNA helicase BAT1. (155 aa)
I79_02565340S ribosomal protein S9. (57 aa)
I79_025570Spliceosome RNA helicase Bat1. (229 aa)
I79_02530140S ribosomal protein S9. (103 aa)
I79_02523640S ribosomal protein S3a. (65 aa)
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (421 aa)
I79_024406A-kinase anchor protein 6. (211 aa)
Pla2g685 kDa calcium-independent phospholipase A2. (77 aa)
Mettl14Methyltransferase-like protein 14; Belongs to the MT-A70-like family. (289 aa)
Abca2ATP-binding cassette sub-family A member 2. (457 aa)
I79_023874Pyruvate kinase; Belongs to the pyruvate kinase family. (233 aa)
I79_023387Uncharacterized protein. (103 aa)
Upf3bRegulator of nonsense transcripts 3B. (89 aa)
Mief1Smith-Magenis syndrome chromosome region candidate gene 7 protein-like. (463 aa)
I79_02304060S ribosomal protein L5. (101 aa)
I79_022677Proton myo-inositol cotransporter. (122 aa)
I79_022371Cell division protein kinase 4. (143 aa)
I79_022365Polymerase delta-interacting protein 3. (108 aa)
Ybx1Nuclease-sensitive element-binding protein 1. (127 aa)
MtorSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2520 aa)
I79_021949Caspase-3; Belongs to the peptidase C14A family. (195 aa)
RxraRetinoic acid receptor RXR-alpha. (439 aa)
I79_021911Casein kinase I isoform epsilon. (370 aa)
I79_02186560S ribosomal protein L5. (174 aa)
RelaTranscription factor p65. (546 aa)
Cpeb1Cytoplasmic polyadenylation element-binding protein 1. (481 aa)
H671_xg20331Eukaryotic translation initiation factor 4 gamma 1 isoform 1. (309 aa)
I79_021360Proton myo-inositol cotransporter. (155 aa)
Habp4Intracellular hyaluronan-binding protein 4. (216 aa)
I79_020958Intracellular hyaluronan-binding protein 4. (123 aa)
I79_020755Pyruvate kinase; Belongs to the pyruvate kinase family. (461 aa)
Akap6A-kinase anchor protein 6. (1368 aa)
I79_020424Pyruvate kinase; Belongs to the pyruvate kinase family. (258 aa)
I79_020401Putative tRNA pseudouridine synthase 2. (326 aa)
Eif5a2Eukaryotic translation initiation factor 5A. (153 aa)
Krt17Keratin, type I cytoskeletal 17; Belongs to the intermediate filament family. (432 aa)
Zcchc4Zinc finger CCHC domain-containing protein 4. (248 aa)
H671_2095240S ribosomal protein S9. (67 aa)
HnrnpdHeterogeneous nuclear ribonucleoprotein D0. (257 aa)
Polr2dDNA-directed RNA polymerase II subunit RPB4. (104 aa)
Prr16Proline-rich protein 16. (234 aa)
I79_018631Putative UDP-sugar transporter protein SLC35A4. (282 aa)
CgPICR_009543RNA-binding protein 4. (360 aa)
Mapk3Mitogen-activated protein kinase. (408 aa)
I79_018306Ephrin type-A receptor 4. (932 aa)
Eif4g3Eukaryotic translation initiation factor 4 gamma 3. (1578 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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