(8 nodes) Dynactin binding network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_012537	Protein bicaudal D-like 2. (783 aa)
	Bicdl1	Coiled-coil domain-containing protein 64A. (51 aa)
	Snx5	Sorting nexin-5. (289 aa)
	Htt	Huntingtin protein. (2928 aa)
	Gsk3b	Glycogen synthase kinase-3 beta. (328 aa)
	I79_008980	Bardet-Biedl syndrome 4 protein-like. (104 aa)
	Bbs4	Bardet-Biedl syndrome 4 protein-like. (125 aa)
	Bicd1	Protein bicaudal D-like 1. (288 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bbs4	I79_008980	G3HEJ7	G3HEJ6	Bardet-Biedl syndrome 4 protein-like.	Bardet-Biedl syndrome 4 protein-like.	0.450
Bicd1	I79_012537	G3IDF7	G3HP33	Protein bicaudal D-like 1.	Protein bicaudal D-like 2.	0.692
Bicdl1	I79_012537	G3GU72	G3HP33	Coiled-coil domain-containing protein 64A.	Protein bicaudal D-like 2.	0.477
Gsk3b	Htt	G3HAI0	G3GWA8	Glycogen synthase kinase-3 beta.	Huntingtin protein.	0.427
Htt	Gsk3b	G3GWA8	G3HAI0	Huntingtin protein.	Glycogen synthase kinase-3 beta.	0.427
I79_008980	Bbs4	G3HEJ6	G3HEJ7	Bardet-Biedl syndrome 4 protein-like.	Bardet-Biedl syndrome 4 protein-like.	0.450
I79_012537	Bicd1	G3HP33	G3IDF7	Protein bicaudal D-like 2.	Protein bicaudal D-like 1.	0.692
I79_012537	Bicdl1	G3HP33	G3GU72	Protein bicaudal D-like 2.	Coiled-coil domain-containing protein 64A.	0.477