STRINGSTRING
I79_022055 I79_022055 Xbp1 Xbp1 Smad7 Smad7 Abca1 Abca1 I79_001733 I79_001733 Nfe2l2 Nfe2l2 I79_006745 I79_006745 Smad6 Smad6 Tgfb3 Tgfb3 Tgfb1 Tgfb1 Klf4 Klf4 Ass1 Ass1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_022055Argininosuccinate synthase. (97 aa)
Xbp1X-box binding protein 1 isoform 1. (330 aa)
Smad7Mothers against decapentaplegic-like 7. (256 aa)
Abca1ATP-binding cassette sub-family A member 1. (2261 aa)
I79_001733Mitogen-activated protein kinase. (1186 aa)
Nfe2l2Nuclear factor erythroid 2-related factor 2. (588 aa)
I79_006745Mothers against decapentaplegic-like 6. (71 aa)
Smad6Mothers against decapentaplegic-like 6. (174 aa)
Tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (410 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
Klf4Krueppel-like factor 4. (474 aa)
Ass1Argininosuccinate synthase. (242 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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