STRINGSTRING
I79_005238 I79_005238 Arid5a Arid5a Tada2b Tada2b Nos1 Nos1 Gata3 Gata3 I79_016646 I79_016646 Paxip1 Paxip1 Rps6ka4 Rps6ka4 Arrb1 Arrb1 Nap1l2 Nap1l2 I79_016664 I79_016664 Lif Lif I79_017896 I79_017896 Mapk3 Mapk3 Tgfb1 Tgfb1 Tada2a Tada2a Smarcb1 Smarcb1 Wbp2 Wbp2 Smad4 Smad4 I79_013678 I79_013678 Snai2 Snai2 Foxp3 Foxp3 Brca1 Brca1 Kat2a Kat2a I79_010901 I79_010901 Muc1 Muc1 I79_008000 I79_008000 I79_006232 I79_006232 I79_005608 I79_005608 Isl1 Isl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_005238RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (193 aa)
Arid5aAT-rich interactive domain-containing protein 5A. (588 aa)
Tada2bTranscriptional adapter 2-beta. (328 aa)
Nos1Nitric oxide synthase; Produces nitric oxide (NO). (1413 aa)
Gata3Trans-acting T-cell-specific transcription factor GATA-3. (443 aa)
I79_016646RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (518 aa)
Paxip1PAX-interacting protein 1. (91 aa)
Rps6ka4Ribosomal protein S6 kinase alpha-4. (254 aa)
Arrb1Beta-arrestin-1. (422 aa)
Nap1l2Nucleosome assembly protein 1-like 2; Belongs to the nucleosome assembly protein (NAP) family. (463 aa)
I79_016664PIH1 domain-containing protein 1. (280 aa)
LifLeukemia inhibitory factor-like protein. (158 aa)
I79_017896Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (427 aa)
Mapk3Mitogen-activated protein kinase. (408 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
Tada2aTranscriptional adapter. (443 aa)
Smarcb1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (348 aa)
Wbp2WW domain-binding protein 2. (261 aa)
Smad4Mothers against decapentaplegic-like 4. (259 aa)
I79_013678Putative oxidoreductase GLYR1. (462 aa)
Snai2Zinc finger protein SNAI2-like protein. (268 aa)
Foxp3Forkhead box protein P3. (428 aa)
Brca1Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] (1790 aa)
Kat2aHistone acetyltransferase KAT2A. (663 aa)
I79_010901Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (584 aa)
Muc1Mucin-1. (105 aa)
I79_008000Mucin-1. (220 aa)
I79_006232PAX-interacting protein 1. (79 aa)
I79_005608Bromodomain-containing protein 7. (649 aa)
Isl1Insulin gene enhancer protein ISL-1. (257 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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