STRINGSTRING
Hoga1 Hoga1 Myc Myc Egr2 Egr2 MED20-3 MED20-3 Bcl9l Bcl9l I79_024341 I79_024341 I79_024210 I79_024210 I79_023773 I79_023773 Gtf3c5 Gtf3c5 I79_022007 I79_022007 I79_021907 I79_021907 Emd Emd Znf689 Znf689 Atf3 Atf3 Lemd2 Lemd2 Selenon Selenon I79_017350 I79_017350 MED20-2 MED20-2 Myf6 Myf6 Myf5 Myf5 I79_015725 I79_015725 I79_015358 I79_015358 Asb2 Asb2 Rb1 Rb1 MED20 MED20 Btg2 Btg2 Heyl Heyl I79_011902 I79_011902 Sap30 Sap30 I79_010844 I79_010844 I79_010136 I79_010136 Mef2d Mef2d Fos Fos Cdon Cdon Egr1 Egr1 I79_008884 I79_008884 Hivep3 Hivep3 Sox8 Sox8 Mef2c Mef2c Klhl40 Klhl40 Barx2 Barx2 Ankrd33b Ankrd33b I79_006225 I79_006225 Snw1 Snw1 Foxn2 Foxn2 Klf5 Klf5 Ankrd1 Ankrd1 Myog Myog Bcl9 Bcl9 Hlf Hlf I79_003941 I79_003941 Msrb3 Msrb3 Eomes Eomes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hoga1Dihydrodipicolinate synthase-like, mitochondrial. (804 aa)
MycMyc proto-oncogene protein. (281 aa)
Egr2Early growth response protein 2. (410 aa)
MED20-3Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (136 aa)
Bcl9lB-cell CLL/lymphoma 9-like protein. (1497 aa)
I79_024341Paired mesoderm homeobox protein 2B. (182 aa)
I79_024210Nuclear protein 1. (103 aa)
I79_023773Nuclear receptor subfamily 4 group A member 1. (924 aa)
Gtf3c5General transcription factor 3C polypeptide 5. (518 aa)
I79_022007Homeobox protein SIX4. (673 aa)
I79_021907Transcription factor MafF. (154 aa)
EmdEmerin. (186 aa)
Znf689Zinc finger protein 689. (500 aa)
Atf3Cyclic AMP-dependent transcription factor ATF-3. (181 aa)
Lemd2LEM domain-containing protein 2. (271 aa)
SelenonSelenoprotein N. (343 aa)
I79_017350Myoblast determination protein 1. (112 aa)
MED20-2Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (204 aa)
Myf6Myogenic factor 6. (182 aa)
Myf5Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (255 aa)
I79_015725Paired box protein Pax-7. (318 aa)
I79_015358Basic helix-loop-helix transcription factor scleraxis. (191 aa)
Asb2Ankyrin repeat and SOCS box protein 2. (639 aa)
Rb1Retinoblastoma-associated protein. (302 aa)
MED20Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (138 aa)
Btg2Protein BTG2. (158 aa)
HeylHairy/enhancer-of-split related with YRPW motif-like protein. (300 aa)
I79_011902Paired box protein Pax-5. (386 aa)
Sap30Histone deacetylase complex subunit SAP30. (220 aa)
I79_010844SET and MYND domain-containing protein 1. (467 aa)
I79_010136Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (230 aa)
Mef2dMyocyte-specific enhancer factor 2D. (505 aa)
FosProto-oncogene protein c-fos. (381 aa)
CdonCell adhesion molecule-related/down-regulated by oncogenes. (1254 aa)
Egr1Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family. (421 aa)
I79_008884Myosin light chain kinase 2, skeletal/cardiac muscle. (747 aa)
Hivep3Transcription factor HIVEP3. (2361 aa)
Sox8Transcription factor SOX-8. (463 aa)
Mef2cMyocyte-specific enhancer factor 2C. (465 aa)
Klhl40Kelch repeat and BTB domain-containing protein 5. (621 aa)
Barx2Homeobox protein BarH-like 2. (279 aa)
Ankrd33bAnkyrin repeat domain-containing protein 33B. (367 aa)
I79_006225Sonic hedgehog protein. (226 aa)
Snw1SNW domain-containing protein 1. (536 aa)
Foxn2Forkhead box protein N2. (423 aa)
Klf5Krueppel-like factor 5. (366 aa)
Ankrd1Ankyrin repeat domain-containing protein 1. (319 aa)
MyogMyogenin. (224 aa)
Bcl9B-cell CLL/lymphoma 9 protein. (1399 aa)
HlfHepatic leukemia factor. (295 aa)
I79_003941Multiple epidermal growth factor-like domains 10. (800 aa)
Msrb3Inner nuclear membrane protein Man1. (479 aa)
EomesEomesodermin-like. (446 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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