STRINGSTRING
Pgm5 Pgm5 Krt8 Krt8 I79_025018 I79_025018 Vcl Vcl I79_005408 I79_005408 Dag1 Dag1 I79_009066 I79_009066 I79_011213 I79_011213 Sdc4 Sdc4 I79_012171 I79_012171 ilk ilk Fxr1 Fxr1 Homer1 Homer1 Cmya5 Cmya5 Dmd Dmd I79_019825 I79_019825 I79_022161 I79_022161 Ank2 Ank2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pgm5Phosphoglucomutase-like protein 5; Belongs to the phosphohexose mutase family. (480 aa)
Krt8Keratin, type II cytoskeletal 8; Belongs to the intermediate filament family. (488 aa)
I79_025018Ankyrin-2. (85 aa)
VclVinculin. (1143 aa)
I79_005408Small muscular protein. (75 aa)
Dag1Dystroglycan. (893 aa)
I79_009066Keratin, type II cytoskeletal 8; Belongs to the intermediate filament family. (426 aa)
I79_011213Synemin. (1315 aa)
Sdc4Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (202 aa)
I79_012171Supervillin. (2092 aa)
ilkIntegrin-linked protein kinase. (452 aa)
Fxr1Fragile X mental retardation syndrome-related protein 1. (72 aa)
Homer1Homer protein-like 1. (366 aa)
Cmya5Cardiomyopathy-associated protein 5. (2184 aa)
DmdDystrophin. (617 aa)
I79_019825Keratin, type I cytoskeletal 19; Belongs to the intermediate filament family. (403 aa)
I79_022161Dystrophin. (655 aa)
Ank2Ankyrin-2. (3299 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.