STRINGSTRING
Ppargc1a Ppargc1a I79_022390 I79_022390 Myog Myog Slc4a1 Slc4a1 Stat3 Stat3 Ier3 Ier3 Git1 Git1 I79_013817 I79_013817 Hdac4 Hdac4 Ddit4 Ddit4 I79_024892 I79_024892 I79_024210 I79_024210 Cbfa2t3 Cbfa2t3 Tigar Tigar Ncor1 Ncor1 I79_001744 I79_001744 Actn3 Actn3 Ppara Ppara
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ppargc1aPeroxisome proliferator-activated receptor gamma coactivator 1-alpha. (894 aa)
I79_022390Peroxisome proliferator-activated receptor alpha. (110 aa)
MyogMyogenin. (224 aa)
Slc4a1Anion exchange protein. (915 aa)
Stat3Signal transducer and activator of transcription. (770 aa)
Ier3Radiation-inducible immediate-early gene IEX-1. (160 aa)
Git1ARF GTPase-activating protein GIT1. (809 aa)
I79_013817NAD-dependent deacetylase sirtuin-6. (334 aa)
Hdac4Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (966 aa)
Ddit4DNA-damage-inducible transcript 4 protein. (231 aa)
I79_024892Fructose-1,6-bisphosphatase 1. (66 aa)
I79_024210Nuclear protein 1. (103 aa)
Cbfa2t3Protein CBFA2T3. (593 aa)
TigarPutative fructose-2,6-bisphosphatase TIGAR. (266 aa)
Ncor1Nuclear receptor corepressor 1. (1591 aa)
I79_001744Nuclear receptor corepressor 1. (680 aa)
Actn3Alpha-actinin-3. (900 aa)
PparaPeroxisome proliferator-activated receptor alpha. (393 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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