STRINGSTRING
I79_012765 I79_012765 Dyrk1a Dyrk1a Ptbp3 Ptbp3 C1qbp C1qbp Srsf4 Srsf4 Hnrnpa2b1 Hnrnpa2b1 Rbm10 Rbm10 I79_017119 I79_017119 I79_017668 I79_017668 Rnps1 Rnps1 Srsf9 Srsf9 I79_019198 I79_019198 I79_019199 I79_019199 CgPICR_014162 CgPICR_014162 I79_023431 I79_023431 I79_024976 I79_024976 I79_006472 I79_006472 Pcbp4 Pcbp4 Sap18 Sap18 Srsf6 Srsf6 Ptbp1 Ptbp1 I79_012076 I79_012076 U2af2 U2af2 Srsf7 Srsf7 I79_013410 I79_013410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_012765U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (469 aa)
Dyrk1aDual specificity tyrosine-phosphorylation-regulated kinase 1A. (761 aa)
Ptbp3Regulator of differentiation 1. (523 aa)
C1qbpComplement component 1 Q subcomponent-binding protein, mitochondrial. (209 aa)
Srsf4Splicing factor, arginine/serine-rich 4. (368 aa)
Hnrnpa2b1Heterogeneous nuclear ribonucleoproteins A2/B1. (282 aa)
Rbm10RNA-binding protein 10. (1001 aa)
I79_017119CUG-BP-and ETR-3-like factor 4. (135 aa)
I79_017668Splicing factor, arginine/serine-rich 8. (945 aa)
Rnps1RNA-binding protein with serine-rich domain 1. (248 aa)
Srsf9Splicing factor, arginine/serine-rich 9. (91 aa)
I79_019198Putative RNA-binding protein 20. (756 aa)
I79_019199Putative RNA-binding protein 20. (349 aa)
CgPICR_014162Polypyrimidine tract-binding protein 1. (575 aa)
I79_023431Polypyrimidine tract-binding protein 1. (323 aa)
I79_024976Polypyrimidine tract-binding protein 1. (99 aa)
I79_006472Polypyrimidine tract-binding protein 1. (119 aa)
Pcbp4Poly(RC)-binding protein 4. (403 aa)
Sap18Histone deacetylase complex subunit SAP18. (91 aa)
Srsf6Splicing factor, arginine/serine-rich 6. (210 aa)
Ptbp1Polypyrimidine tract-binding protein 1. (528 aa)
I79_012076FUS-interacting serine-arginine-rich protein 1. (72 aa)
U2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (422 aa)
Srsf7Splicing factor, arginine/serine-rich 7. (227 aa)
I79_013410Apoptotic chromatin condensation inducer in the nucleus. (1230 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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