11 items (Cricetulus griseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Efemp2	EGF-containing fibulin-like extracellular matrix protein 2. (375 aa)
	I79_023010	Latent-transforming growth factor beta-binding protein 3. (624 aa)
	I79_024083	Protein-lysine 6-oxidase. (123 aa)
	Col3a1	Collagen alpha-1(III) chain. (1051 aa)
	I79_003637	Low-density lipoprotein receptor-related protein 4. (766 aa)
	Emilin1	EMILIN-1. (1017 aa)
	Thsd4	Thrombospondin type-1 domain-containing protein 4. (651 aa)
	I79_004888	Thrombospondin type-1 domain-containing protein 4. (284 aa)
	I79_009389	Myosin-11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1972 aa)
	Atp7a	Copper-transporting ATPase 1. (1457 aa)
	I79_016430	Tenascin-X. (2530 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Col3a1	Efemp2	G3IM20	G3I2G7	Collagen alpha-1(III) chain.	EGF-containing fibulin-like extracellular matrix protein 2.	0.663
Col3a1	I79_024083	G3IM20	G3IJP7	Collagen alpha-1(III) chain.	Protein-lysine 6-oxidase.	0.544
Efemp2	Col3a1	G3I2G7	G3IM20	EGF-containing fibulin-like extracellular matrix protein 2.	Collagen alpha-1(III) chain.	0.663
Efemp2	I79_024083	G3I2G7	G3IJP7	EGF-containing fibulin-like extracellular matrix protein 2.	Protein-lysine 6-oxidase.	0.638
I79_004888	Thsd4	G3H3Q9	G3H3Q8	Thrombospondin type-1 domain-containing protein 4.	Thrombospondin type-1 domain-containing protein 4.	0.730
I79_024083	Col3a1	G3IJP7	G3IM20	Protein-lysine 6-oxidase.	Collagen alpha-1(III) chain.	0.544
I79_024083	Efemp2	G3IJP7	G3I2G7	Protein-lysine 6-oxidase.	EGF-containing fibulin-like extracellular matrix protein 2.	0.638
Thsd4	I79_004888	G3H3Q8	G3H3Q9	Thrombospondin type-1 domain-containing protein 4.	Thrombospondin type-1 domain-containing protein 4.	0.730