(17 nodes) Golgi inheritance network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_005318	Serine/threonine-protein kinase 25. (377 aa)
	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1. (101 aa)
	Stx5	Syntaxin-5; Belongs to the syntaxin family. (170 aa)
	I79_023329	Syntaxin-5. (144 aa)
	Golga2	Golgin subfamily A member 2. (567 aa)
	I79_016797	Dual specificity mitogen-activated protein kinase kinase 1. (129 aa)
	Arpc5l	Golgin subfamily A member 2. (255 aa)
	Gbf1	Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (1857 aa)
	Cdk1	Cell division control protein 2-like; Belongs to the protein kinase superfamily. (297 aa)
	I79_014482	Vacuolar protein sorting-associated protein 13B. (239 aa)
	I79_014481	Vacuolar protein sorting-associated protein 13B. (617 aa)
	I79_014480	Vacuolar protein sorting-associated protein 13B. (2571 aa)
	Pdcd10	Programmed cell death protein 10. (210 aa)
	Ywhaz	14-3-3 protein zeta/delta; Belongs to the 14-3-3 family. (245 aa)
	Vrk1	Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily. (396 aa)
	Plk5	Serine/threonine-protein kinase PLK5. (535 aa)
	Plk3	Uncharacterized protein. (611 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arpc5l	I79_023329	G3HZI0	G3IHN3	Golgin subfamily A member 2.	Syntaxin-5.	0.858
Arpc5l	Stx5	G3HZI0	G3II26	Golgin subfamily A member 2.	Syntaxin-5; Belongs to the syntaxin family.	0.858
Cdk1	I79_016797	G3HVL1	G3I0B8	Cell division control protein 2-like; Belongs to the protein kinase superfamily.	Dual specificity mitogen-activated protein kinase kinase 1.	0.615
Cdk1	Map2k1	G3HVL1	G3INJ6	Cell division control protein 2-like; Belongs to the protein kinase superfamily.	Dual specificity mitogen-activated protein kinase kinase 1.	0.572
Cdk1	Plk3	G3HVL1	G3GYR6	Cell division control protein 2-like; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.723
Cdk1	Plk5	G3HVL1	G3HF85	Cell division control protein 2-like; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase PLK5.	0.659
Golga2	I79_023329	G3IBJ2	G3IHN3	Golgin subfamily A member 2.	Syntaxin-5.	0.858
Golga2	Stx5	G3IBJ2	G3II26	Golgin subfamily A member 2.	Syntaxin-5; Belongs to the syntaxin family.	0.858
I79_005318	Pdcd10	G3H4V4	G3HQ99	Serine/threonine-protein kinase 25.	Programmed cell death protein 10.	0.989
I79_014480	I79_014481	G3HU72	G3HU73	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.942
I79_014480	I79_014482	G3HU72	G3HU74	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.933
I79_014481	I79_014480	G3HU73	G3HU72	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.942
I79_014481	I79_014482	G3HU73	G3HU74	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.947
I79_014482	I79_014480	G3HU74	G3HU72	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.933
I79_014482	I79_014481	G3HU74	G3HU73	Vacuolar protein sorting-associated protein 13B.	Vacuolar protein sorting-associated protein 13B.	0.947
I79_016797	Cdk1	G3I0B8	G3HVL1	Dual specificity mitogen-activated protein kinase kinase 1.	Cell division control protein 2-like; Belongs to the protein kinase superfamily.	0.615
I79_016797	Ywhaz	G3I0B8	G3HKZ1	Dual specificity mitogen-activated protein kinase kinase 1.	14-3-3 protein zeta/delta; Belongs to the 14-3-3 family.	0.665
I79_023329	Arpc5l	G3IHN3	G3HZI0	Syntaxin-5.	Golgin subfamily A member 2.	0.858
I79_023329	Golga2	G3IHN3	G3IBJ2	Syntaxin-5.	Golgin subfamily A member 2.	0.858
I79_023329	Stx5	G3IHN3	G3II26	Syntaxin-5.	Syntaxin-5; Belongs to the syntaxin family.	0.899