STRINGSTRING
Rtn4rl1 Rtn4rl1 I79_024593 I79_024593 I79_025170 I79_025170 I79_001461 I79_001461 I79_001955 I79_001955 I79_001957 I79_001957 I79_003408 I79_003408 Myo9b Myo9b Lrtm2 Lrtm2 Lgr4 Lgr4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rtn4rl1Reticulon-4 receptor-like 1. (410 aa)
I79_024593Uncharacterized protein. (194 aa)
I79_025170Slit-like 2 protein. (345 aa)
I79_001461Leucine-rich repeat and transmembrane domain-containing protein 1. (308 aa)
I79_001955Slit-like 3 protein. (566 aa)
I79_001957Slit-like 3 protein. (751 aa)
I79_003408Slit-like 1 protein. (1482 aa)
Myo9bMyosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1987 aa)
Lrtm2Leucine-rich repeat and transmembrane domain-containing protein 2. (370 aa)
Lgr4Leucine-rich repeat-containing G-protein coupled receptor 4. (231 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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