(13 nodes) Embryonic foregut morphogenesis network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_023429	Forkhead box protein P4. (631 aa)
	I79_023436	Forkhead box protein P4. (104 aa)
	Foxf1	Forkhead box protein F1. (320 aa)
	I79_025680	Forkhead box protein P4. (206 aa)
	I79_025679	Forkhead box protein P4. (346 aa)
	Epb41l5	Band 4.1-like protein 5. (717 aa)
	I79_006225	Sonic hedgehog protein. (226 aa)
	I79_006673	Nck-associated protein 1. (951 aa)
	Smad3	Mothers against decapentaplegic homolog. (363 aa)
	Ctnnb1	Catenin beta-1. (781 aa)
	Smad2	Mothers against decapentaplegic homolog. (467 aa)
	Acvr2b	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (559 aa)
	Foxp4	Forkhead box protein P4. (685 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acvr2b	Smad2	G3HQV6	G3HAD0	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.969
Acvr2b	Smad3	G3HQV6	G3H8N9	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.957
Ctnnb1	I79_006225	G3H996	G3H796	Catenin beta-1.	Sonic hedgehog protein.	0.553
Ctnnb1	Smad2	G3H996	G3HAD0	Catenin beta-1.	Mothers against decapentaplegic homolog.	0.829
Ctnnb1	Smad3	G3H996	G3H8N9	Catenin beta-1.	Mothers against decapentaplegic homolog.	0.883
Foxf1	I79_006225	G3GRV9	G3H796	Forkhead box protein F1.	Sonic hedgehog protein.	0.570
I79_006225	Ctnnb1	G3H796	G3H996	Sonic hedgehog protein.	Catenin beta-1.	0.553
I79_006225	Foxf1	G3H796	G3GRV9	Sonic hedgehog protein.	Forkhead box protein F1.	0.570
I79_025679	I79_025680	G3INY1	G3INY2	Forkhead box protein P4.	Forkhead box protein P4.	0.401
I79_025680	I79_025679	G3INY2	G3INY1	Forkhead box protein P4.	Forkhead box protein P4.	0.401
Smad2	Acvr2b	G3HAD0	G3HQV6	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.969
Smad2	Ctnnb1	G3HAD0	G3H996	Mothers against decapentaplegic homolog.	Catenin beta-1.	0.829
Smad2	Smad3	G3HAD0	G3H8N9	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.997
Smad3	Acvr2b	G3H8N9	G3HQV6	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.957
Smad3	Ctnnb1	G3H8N9	G3H996	Mothers against decapentaplegic homolog.	Catenin beta-1.	0.883
Smad3	Smad2	G3H8N9	G3HAD0	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.997