STRINGSTRING
I79_010613 I79_010613 Smad4 Smad4 I79_015320 I79_015320 I79_016391 I79_016391 Cbx7 Cbx7 Rbpj Rbpj Ext1 Ext1 Tfap2c Tfap2c Ash1l Ash1l I79_024336 I79_024336 I79_024390 I79_024390 I79_007986 I79_007986 Zdhhc21 Zdhhc21 Acer1 Acer1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_010613Transcription factor AP-2 gamma. (236 aa)
Smad4Mothers against decapentaplegic-like 4. (259 aa)
I79_015320Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (477 aa)
I79_016391Acyl-CoA desaturase 1; Belongs to the fatty acid desaturase type 1 family. (254 aa)
Cbx7Chromobox protein-like 7. (60 aa)
RbpjRecombining binding protein suppressor of hairless-like protein. (486 aa)
Ext1Exostosin-1. (388 aa)
Tfap2cTranscription factor AP-2 gamma. (463 aa)
Ash1lPutative histone-lysine N-methyltransferase ASH1L. (1546 aa)
I79_024336Keratin, type II cytoskeletal 3; Belongs to the intermediate filament family. (469 aa)
I79_024390Keratin, type II cytoskeletal 2 oral; Belongs to the intermediate filament family. (655 aa)
I79_007986Putative histone-lysine N-methyltransferase ASH1L. (455 aa)
Zdhhc21Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (265 aa)
Acer1Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (264 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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