STRINGSTRING
Nrp1 Nrp1 I79_024483 I79_024483 Col3a1 Col3a1 I79_025625 I79_025625 LDLR LDLR I79_000092 I79_000092 Prox1 Prox1 Foxf1 Foxf1 I79_000337 I79_000337 Adamts9 Adamts9 Jag1 Jag1 I79_000661 I79_000661 I79_001046 I79_001046 I79_001239 I79_001239 Bmpr2 Bmpr2 I79_003100 I79_003100 I79_003342 I79_003342 Apob Apob Edn1 Edn1 Nog Nog Gja5 Gja5 I79_005088 I79_005088 Smarca4 Smarca4 I79_006254 I79_006254 Tgfbr1 Tgfbr1 Ednra Ednra Tbx2 Tbx2 Hoxa1 Hoxa1 I79_008965 I79_008965 I79_009030 I79_009030 I79_009932 I79_009932 I79_010003 I79_010003 I79_010073 I79_010073 Kat6a Kat6a Fkbp10 Fkbp10 I79_011804 I79_011804 Apoe Apoe I79_012727 I79_012727 Prrx1 Prrx1 I79_012814 I79_012814 I79_012815 I79_012815 Chd7 Chd7 I79_012894 I79_012894 Smad7 Smad7 I79_013660 I79_013660 Pdgfrb Pdgfrb I79_014212 I79_014212 Wnt11 Wnt11 I79_015033 I79_015033 I79_015046 I79_015046 Prdm1 Prdm1 Lrp1 Lrp1 Foxh1 Foxh1 I79_015503 I79_015503 Npm3 Npm3 Srf Srf Folr1 Folr1 H671_1g1119 H671_1g1119 Efemp2 Efemp2 H671_4g11668 H671_4g11668 I79_019149 I79_019149 Arid2 Arid2 Nprl3 Nprl3 Hey2 Hey2 Acvrl1 Acvrl1 Rbpj Rbpj Dll4 Dll4 Six1 Six1 Prrx2 Prrx2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Nrp1Neuropilin; Belongs to the neuropilin family. (923 aa)
I79_024483Polycystin-2. (192 aa)
Col3a1Collagen alpha-1(III) chain. (1051 aa)
I79_025625Polycystin-2. (318 aa)
LDLRLow-density lipoprotein receptor; Binds LDL, the major cholesterol-carrying lipoprotein of plasma, and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits; Belongs to the LDLR family. (862 aa)
I79_000092Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
Prox1Prospero homeobox protein 1. (738 aa)
Foxf1Forkhead box protein F1. (320 aa)
I79_000337A disintegrin and metalloproteinase with thrombospondin motifs 9. (1068 aa)
Adamts9A disintegrin and metalloproteinase with thrombospondin motifs 9. (489 aa)
Jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1186 aa)
I79_000661Myosin light chain kinase, smooth muscle. (1766 aa)
I79_001046Neurofibromin. (2164 aa)
I79_001239Low-density lipoprotein receptor-related protein 2. (4664 aa)
Bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
I79_003100Myocardin. (371 aa)
I79_003342Apolipoprotein B-100. (946 aa)
ApobApolipoprotein B-100. (3537 aa)
Edn1Endothelin-1. (202 aa)
NogNoggin. (117 aa)
Gja5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (358 aa)
I79_005088Cartilage oligomeric matrix protein. (585 aa)
Smarca4Putative global transcription activator SNF2L4. (1614 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
Tgfbr1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (401 aa)
EdnraEndothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (412 aa)
Tbx2T-box transcription factor TBX2. (234 aa)
Hoxa1Homeobox protein Hox-A1. (334 aa)
I79_008965Stimulated by retinoic acid gene 6 protein-like. (553 aa)
I79_009030T-box transcription factor TBX1. (293 aa)
I79_009932Paired mesoderm homeobox protein 2. (163 aa)
I79_010003Zinc finger MIZ domain-containing protein 1. (960 aa)
I79_010073Prostaglandin E2 receptor EP4 subtype; Belongs to the G-protein coupled receptor 1 family. (511 aa)
Kat6aHistone acetyltransferase MYST3. (200 aa)
Fkbp10Peptidylprolyl isomerase. (581 aa)
I79_011804Neurogenic locus notch-like protein 3. (2181 aa)
ApoeApolipoprotein E. (313 aa)
I79_012727Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (441 aa)
Prrx1Paired mesoderm homeobox protein 1. (198 aa)
I79_012814Chromodomain-helicase-DNA-binding protein 7. (100 aa)
I79_012815Chromodomain-helicase-DNA-binding protein 7. (150 aa)
Chd7Chromodomain-helicase-DNA-binding protein 7. (615 aa)
I79_012894Transcription factor AP-2 beta. (287 aa)
Smad7Mothers against decapentaplegic-like 7. (256 aa)
I79_013660Beta-type platelet-derived growth factor receptor. (454 aa)
PdgfrbBeta-type platelet-derived growth factor receptor. (528 aa)
I79_014212Putative G-protein coupled receptor 116; Belongs to the G-protein coupled receptor 2 family. (1938 aa)
Wnt11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
I79_015033Hairy/enhancer-of-split related with YRPW motif protein 1. (199 aa)
I79_015046Low-density lipoprotein receptor. (160 aa)
Prdm1PR domain zinc finger protein 1. (825 aa)
Lrp1Prolow-density lipoprotein receptor-related protein 1. (2217 aa)
Foxh1Forkhead box protein H1. (367 aa)
I79_015503Transcription factor HES-1. (92 aa)
Npm3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (337 aa)
SrfSerum response factor. (361 aa)
Folr1Folate receptor alpha. (257 aa)
H671_1g111915-hydroxyprostaglandin dehydrogenase [NAD+]-like protein. (208 aa)
Efemp2EGF-containing fibulin-like extracellular matrix protein 2. (375 aa)
H671_4g11668Chordin. (842 aa)
I79_019149Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (132 aa)
Arid2AT-rich interactive domain-containing protein 2. (1284 aa)
Nprl3UPF0171 protein C16orf35-like. (569 aa)
Hey2Hairy/enhancer-of-split related with YRPW motif protein 2. (276 aa)
Acvrl1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (776 aa)
RbpjRecombining binding protein suppressor of hairless-like protein. (486 aa)
Dll4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (578 aa)
Six1Homeobox protein SIX1. (284 aa)
Prrx2Paired mesoderm homeobox protein 2. (185 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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