STRINGSTRING
Sema5a Sema5a Colec10 Colec10 I79_007063 I79_007063 I79_007548 I79_007548 Tsc2 Tsc2 Pgf Pgf Vegfc Vegfc I79_009992 I79_009992 Cx3cl1 Cx3cl1 I79_010622 I79_010622 Lrrc1 Lrrc1 Hgf Hgf I79_013970 I79_013970 Lrp1 Lrp1 I79_015381 I79_015381 Npm3 Npm3 Nrp1 Nrp1 Pdgfb Pdgfb I79_018349 I79_018349 CgPICR_003405 CgPICR_003405 I79_019149 I79_019149 Vegfb Vegfb I79_019773 I79_019773 Ccl5 Ccl5 Fgf7 Fgf7 I79_021283 I79_021283 Wnt7b Wnt7b Scg2 Scg2 I79_001239 I79_001239 Ntf3 Ntf3 Wnt5a Wnt5a Ptprj Ptprj Alkbh1 Alkbh1 Lgals3 Lgals3 I79_006254 I79_006254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sema5aSemaphorin-5A. (1046 aa)
Colec10Collectin-10. (277 aa)
I79_007063Hepatocyte growth factor receptor. (1222 aa)
I79_007548Angiopoietin-1. (112 aa)
Tsc2Tuberin. (1546 aa)
PgfPlacenta growth factor; Belongs to the PDGF/VEGF growth factor family. (154 aa)
VegfcVascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (346 aa)
I79_009992Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (259 aa)
Cx3cl1Fractalkine. (335 aa)
I79_010622Leucine-rich repeat-containing protein 1. (119 aa)
Lrrc1Leucine-rich repeat-containing protein 1. (167 aa)
HgfHepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. (728 aa)
I79_013970Plexin-B3. (1806 aa)
Lrp1Prolow-density lipoprotein receptor-related protein 1. (2217 aa)
I79_015381Protein scribble-like. (789 aa)
Npm3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (337 aa)
Nrp1Neuropilin; Belongs to the neuropilin family. (923 aa)
PdgfbPlatelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (205 aa)
I79_018349Coronin-1A. (143 aa)
CgPICR_003405C-C motif chemokine. (98 aa)
I79_019149Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (132 aa)
VegfbVascular endothelial growth factor B; Belongs to the PDGF/VEGF growth factor family. (150 aa)
I79_019773Protein S100-A15A. (108 aa)
Ccl5C-C motif chemokine. (91 aa)
Fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (194 aa)
I79_021283Angiopoietin-1. (298 aa)
Wnt7bProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
Scg2Secretogranin-2. (763 aa)
I79_001239Low-density lipoprotein receptor-related protein 2. (4664 aa)
Ntf3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (258 aa)
Wnt5aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (330 aa)
PtprjReceptor-type tyrosine-protein phosphatase eta. (1077 aa)
Alkbh1Alkylated DNA repair protein alkB-like 1. (258 aa)
Lgals3Galectin. (281 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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