STRINGSTRING
I79_010159 I79_010159 Robo1 Robo1 I79_001461 I79_001461 I79_001955 I79_001955 I79_001957 I79_001957 I79_002693 I79_002693 Nrg3 Nrg3 Itgb3 Itgb3 I79_016618 I79_016618 I79_025170 I79_025170 I79_024593 I79_024593 Sema4g Sema4g Rtn4rl1 Rtn4rl1 Sema4b Sema4b Efna5 Efna5 I79_021038 I79_021038 Plxna3 Plxna3 Sema4f Sema4f Apoa1 Apoa1 Lgr4 Lgr4 Unc5c Unc5c I79_018312 I79_018312 I79_003408 I79_003408 I79_012498 I79_012498 I79_012231 I79_012231 Sema4c Sema4c Plxna4 Plxna4 Sema3e Sema3e Sema3a Sema3a Sema3c Sema3c I79_011943 I79_011943 Sema6c Sema6c Sema5a Sema5a Lrtm2 Lrtm2 Sema3b Sema3b Sema3f Sema3f I79_007709 I79_007709 I79_018218 I79_018218 Sema6b Sema6b I79_014451 I79_014451 Sema6a Sema6a Sema3d Sema3d I79_008405 I79_008405 Flrt3 Flrt3 Nrp2 Nrp2 Sema7a Sema7a Sema4a Sema4a I79_011935 I79_011935 I79_011934 I79_011934 H671_3g8622 H671_3g8622 Itgav Itgav Wnt5a Wnt5a Flrt2 Flrt2 I79_000700 I79_000700 I79_000669 I79_000669
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_010159Roundabout-like 1. (1362 aa)
Robo1Roundabout-like 1. (129 aa)
I79_001461Leucine-rich repeat and transmembrane domain-containing protein 1. (308 aa)
I79_001955Slit-like 3 protein. (566 aa)
I79_001957Slit-like 3 protein. (751 aa)
I79_002693Netrin-1. (252 aa)
Nrg3Pro-neuregulin-3, membrane-bound isoform. (153 aa)
Itgb3Integrin beta; Belongs to the integrin beta chain family. (975 aa)
I79_016618Dipeptidyl peptidase 4; Belongs to the peptidase S9B family. (470 aa)
I79_025170Slit-like 2 protein. (345 aa)
I79_024593Uncharacterized protein. (194 aa)
Sema4gSemaphorin-4G; Belongs to the semaphorin family. (757 aa)
Rtn4rl1Reticulon-4 receptor-like 1. (410 aa)
Sema4bSemaphorin-4B; Belongs to the semaphorin family. (792 aa)
Efna5Ephrin-A5; Belongs to the ephrin family. (172 aa)
I79_021038Plexin-A3. (334 aa)
Plxna3Plexin-A3. (656 aa)
Sema4fSemaphorin-4F; Belongs to the semaphorin family. (751 aa)
Apoa1Apolipoprotein A-I. (264 aa)
Lgr4Leucine-rich repeat-containing G-protein coupled receptor 4. (231 aa)
Unc5cNetrin receptor UNC5C. (873 aa)
I79_018312Tyrosine-protein kinase RYK. (163 aa)
I79_003408Slit-like 1 protein. (1482 aa)
I79_012498Semaphorin-6A. (305 aa)
I79_012231Plexin-A4. (332 aa)
Sema4cSemaphorin-4C; Belongs to the semaphorin family. (834 aa)
Plxna4Plexin-A4. (1078 aa)
Sema3eSemaphorin-3E; Belongs to the semaphorin family. (777 aa)
Sema3aSemaphorin-3A-like protein; Belongs to the semaphorin family. (758 aa)
Sema3cSemaphorin-3C; Belongs to the semaphorin family. (493 aa)
I79_011943Semaphorin-3C. (86 aa)
Sema6cSemaphorin-6C; Belongs to the semaphorin family. (331 aa)
Sema5aSemaphorin-5A. (1046 aa)
Lrtm2Leucine-rich repeat and transmembrane domain-containing protein 2. (370 aa)
Sema3bSemaphorin-3B; Belongs to the semaphorin family. (749 aa)
Sema3fSemaphorin-3F; Belongs to the semaphorin family. (785 aa)
I79_007709SCO-spondin. (353 aa)
I79_018218Plexin-A4. (498 aa)
Sema6bSemaphorin-6B; Belongs to the semaphorin family. (823 aa)
I79_014451Pro-neuregulin-1, membrane-bound isoform. (639 aa)
Sema6aSemaphorin-6A; Belongs to the semaphorin family. (503 aa)
Sema3dSemaphorin-3D; Belongs to the semaphorin family. (759 aa)
I79_008405Tyrosine-protein kinase RYK. (141 aa)
Flrt3Leucine-rich repeat transmembrane protein FLRT3. (649 aa)
Nrp2Neuropilin; Belongs to the neuropilin family. (909 aa)
Sema7aSemaphorin-7A; Belongs to the semaphorin family. (560 aa)
Sema4aSemaphorin-4A; Belongs to the semaphorin family. (761 aa)
I79_011935Semaphorin-6D; Belongs to the semaphorin family. (780 aa)
I79_011934Semaphorin-6D. (150 aa)
H671_3g8622Semaphorin-4D; Belongs to the semaphorin family. (833 aa)
ItgavIntegrin alpha-V; Belongs to the integrin alpha chain family. (944 aa)
Wnt5aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (330 aa)
Flrt2Leucine-rich repeat transmembrane protein FLRT2. (660 aa)
I79_000700Receptor protein-tyrosine kinase. (871 aa)
I79_000669Semaphorin-5B. (979 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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