STRINGSTRING
Mecp2 Mecp2 I79_003100 I79_003100 Dnmt1 Dnmt1 I79_005895 I79_005895 Olfm2 Olfm2 I79_006225 I79_006225 I79_006254 I79_006254 I79_006679 I79_006679 Sirt1 Sirt1 Smarcd3 Smarcd3 Cth Cth Nfatc1 Nfatc1 Tshz3 Tshz3 Prdm6 Prdm6 Nfatc3 Nfatc3 Zeb1 Zeb1 Rcan1 Rcan1 Med28 Med28 Gper1 Gper1 I79_015250 I79_015250 Sod2 Sod2 Efemp2 Efemp2 Pdgfb Pdgfb Pdcd4 Pdcd4 Foxo4 Foxo4 Ccdc142 Ccdc142 Tgfb1 Tgfb1 Ankrd17 Ankrd17 Ereg Ereg I79_023926 I79_023926 Nfatc2 Nfatc2 Fgfr2 Fgfr2 Kit Kit
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mecp2Methyl-CpG-binding protein 2. (203 aa)
I79_003100Myocardin. (371 aa)
Dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1494 aa)
I79_005895DNA (Cytosine-5)-methyltransferase 1. (85 aa)
Olfm2Noelin-2. (222 aa)
I79_006225Sonic hedgehog protein. (226 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
I79_006679Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (156 aa)
Sirt1NAD-dependent deacetylase sirtuin-1. (554 aa)
Smarcd3SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3. (300 aa)
CthCystathionine gamma-lyase. (423 aa)
Nfatc1Nuclear factor of activated T-cells, cytoplasmic 1. (203 aa)
Tshz3Teashirt-like 3. (248 aa)
Prdm6Putative histone-lysine N-methyltransferase PRDM6. (295 aa)
Nfatc3Nuclear factor of activated T-cells, cytoplasmic 3. (1075 aa)
Zeb1Zinc finger E-box-binding homeobox 1. (1078 aa)
Rcan1Calcipressin-1. (197 aa)
Med28Mediator of RNA polymerase II transcription subunit 28-like protein. (178 aa)
Gper1G-protein coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (371 aa)
I79_015250Mediator of RNA polymerase II transcription subunit 28. (132 aa)
Sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (176 aa)
Efemp2EGF-containing fibulin-like extracellular matrix protein 2. (375 aa)
PdgfbPlatelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (205 aa)
Pdcd4Programmed cell death protein 4. (469 aa)
Foxo4Forkhead box protein O4. (506 aa)
Ccdc142Coiled-coil domain-containing protein 142. (723 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
Ankrd17Ankyrin repeat domain-containing protein 17. (73 aa)
EregProepiregulin. (162 aa)
I79_023926Nuclear factor of activated T-cells, cytoplasmic 2. (129 aa)
Nfatc2Nuclear factor of activated T-cells, cytoplasmic 2. (602 aa)
Fgfr2Fibroblast growth factor receptor 2. (659 aa)
KitMast/stem cell growth factor receptor. (452 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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