STRINGSTRING
I79_002686 I79_002686 I79_013175 I79_013175 I79_025951 I79_025951 I79_025625 I79_025625 I79_025202 I79_025202 I79_024483 I79_024483 I79_022712 I79_022712 I79_022214 I79_022214 Farsb Farsb Rrm1 Rrm1 Rrm2 Rrm2 H671_1g1582 H671_1g1582 Grin2b Grin2b Farsa Farsa Pkd1 Pkd1 I79_006578 I79_006578 Cbr4 Cbr4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_002686Cleavage and polyadenylation specificity factor subunit 6. (500 aa)
I79_013175Estradiol 17-beta-dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)
I79_025951Keratin, type I cytoskeletal 10; Belongs to the intermediate filament family. (243 aa)
I79_025625Polycystin-2. (318 aa)
I79_025202Phenylalanyl-tRNA synthetase alpha chain. (267 aa)
I79_024483Polycystin-2. (192 aa)
I79_022712Glutamate [NMDA] receptor subunit zeta-1. (998 aa)
I79_022214Cleavage and polyadenylation specificity factor subunit 7. (361 aa)
FarsbPhenylalanyl-tRNA synthetase beta chain. (589 aa)
Rrm1Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (792 aa)
Rrm2Ribonucleoside-diphosphate reductase subunit M2. (390 aa)
H671_1g1582Ribonucleoside-diphosphate reductase subunit M2-like protein. (96 aa)
Grin2bGlutamate [NMDA] receptor subunit epsilon-2. (1373 aa)
FarsaPhenylalanyl-tRNA synthetase alpha chain-like protein. (508 aa)
Pkd1Polycystin-1. (3717 aa)
I79_006578Phenylalanyl-tRNA synthetase alpha chain. (139 aa)
Cbr4Carbonyl reductase family member 4. (236 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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