STRINGSTRING
Ccnh Ccnh CgPICR_000721 CgPICR_000721 CgPICR_000723 CgPICR_000723 I79_012655 I79_012655 I79_012652 I79_012652 Ercc2 Ercc2 I79_012488 I79_012488 Polr3b Polr3b Tbp Tbp Polr1e Polr1e Kat2a Kat2a Polr3g Polr3g Map3k2 Map3k2 I79_010857 I79_010857 Paf1 Paf1 I79_010679 I79_010679 Atxn7 Atxn7 I79_010000 I79_010000 Gtf2h5 Gtf2h5 Polr2e Polr2e Rpap2 Rpap2 Taf4b Taf4b Gtf2f1 Gtf2f1 Supt3h Supt3h Gtf2e1 Gtf2e1 CgPICR_007098 CgPICR_007098 Gtf2f2 Gtf2f2 Gtf2e2 Gtf2e2 I79_005652 I79_005652 I79_005272 I79_005272 Rprd2 Rprd2 Polr3gl Polr3gl Polr3c Polr3c Taf12 Taf12 Rtf1 Rtf1 Wdr61 Wdr61 Polr1b Polr1b I79_002824 I79_002824 Polr2a Polr2a Rprd1b Rprd1b Tada3 Tada3 I79_002329 I79_002329 Taf5l Taf5l Taf4 Taf4 Polr1d Polr1d Polr3d Polr3d I79_000917 I79_000917 Gtf2a2 Gtf2a2 Polr2m Polr2m Myzap Myzap Leo1 Leo1 Taf3 Taf3 CgPICR_016137 CgPICR_016137 I79_024513 I79_024513 Taf1 Taf1 I79_024319 I79_024319 Polr1f Polr1f Pola2 Pola2 I79_023511 I79_023511 Polr3e Polr3e I79_022460 I79_022460 I79_022459 I79_022459 I79_022457 I79_022457 Crcp Crcp Taf10 Taf10 Taf13 Taf13 CgPICR_018060 CgPICR_018060 I79_020821 I79_020821 Tbpl1 Tbpl1 Polr1a Polr1a Polr2b Polr2b I79_019487 I79_019487 Polr2d Polr2d CgPICR_017319 CgPICR_017319 Taf6 Taf6 Polr2f Polr2f Gtf2b Gtf2b Polr2c Polr2c Polr2l Polr2l Polr2h Polr2h Gtf2h1 Gtf2h1 Myo6 Myo6 I79_016946 I79_016946 Prim2 Prim2 Polr1c Polr1c Ctr9 Ctr9 I79_016081 I79_016081 Taf7 Taf7 I79_016019 I79_016019 Trrap Trrap Gtf2h3 Gtf2h3 Polr1h Polr1h Cdc73 Cdc73 I79_014650 I79_014650 Polr2k Polr2k I79_014323 I79_014323 I79_013985 I79_013985 Taf11 Taf11 Cdk7 Cdk7 Taf9 Taf9 I79_013580 I79_013580 Prim1 Prim1 Taf8 Taf8 Pex2 Pex2 Gtf2h4 Gtf2h4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CcnhCyclin-H; Belongs to the cyclin family. (323 aa)
CgPICR_000721Transcriptional adapter 3-like. (83 aa)
CgPICR_000723Transcriptional adapter 3-like. (83 aa)
I79_012655DNA-directed RNA polymerase I subunit RPA34. (332 aa)
I79_012652TFIIH basal transcription factor complex helicase subunit. (108 aa)
Ercc2TFIIH basal transcription factor complex helicase subunit. (141 aa)
I79_012488Transcription initiation factor TFIID subunit 9B. (138 aa)
Polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1133 aa)
TbpTATA-box-binding protein. (315 aa)
Polr1eDNA-directed RNA polymerase I subunit RPA49. (434 aa)
Kat2aHistone acetyltransferase KAT2A. (663 aa)
Polr3gDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (227 aa)
Map3k2TFIIH basal transcription factor complex helicase XPB subunit. (1183 aa)
I79_010857DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (638 aa)
Paf1RNA polymerase II-associated factor 1-like. (537 aa)
I79_010679DNA-directed RNA polymerases I, II, and III subunit RPABC1. (112 aa)
Atxn7Ataxin-7. (756 aa)
I79_010000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1076 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Polr2eDNA-directed RNA polymerases I, II, and III subunit RPABC1. (218 aa)
Rpap2RNA polymerase II-associated protein 2. (607 aa)
Taf4bTranscription initiation factor TFIID subunit 4B. (571 aa)
Gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (508 aa)
Supt3hTranscription initiation protein SPT3-like. (365 aa)
Gtf2e1General transcription factor IIE subunit 1. (438 aa)
CgPICR_007098DNA-directed RNA polymerases I, II, and III subunit RPABC5. (84 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
Gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
I79_005652TFIIA-alpha and beta-like factor. (387 aa)
I79_005272Transcription initiation factor TFIID subunit 7-like. (384 aa)
Rprd2Regulation of nuclear pre-mRNA domain-containing protein 2. (1297 aa)
Polr3glDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (266 aa)
Polr3cRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (533 aa)
Taf12Transcription initiation factor TFIID subunit 12. (161 aa)
Rtf1RNA polymerase-associated protein RTF1-like. (585 aa)
Wdr61WD repeat-containing protein 61. (305 aa)
Polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (996 aa)
I79_002824DNA-directed RNA polymerase II subunit RPB7. (69 aa)
Polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (617 aa)
Rprd1bRegulation of nuclear pre-mRNA domain-containing protein 1B. (326 aa)
Tada3Transcriptional adapter 3-like. (288 aa)
I79_002329Transcriptional adapter 3-like. (156 aa)
Taf5lTAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (589 aa)
Taf4Transcription initiation factor TFIID subunit 4. (630 aa)
Polr1dDNA-directed RNA polymerases I and III subunit RPAC2-like protein. (116 aa)
Polr3dDNA-directed RNA polymerase III subunit RPC4. (398 aa)
I79_000917ATP-dependent DNA helicase Q5. (467 aa)
Gtf2a2Transcription initiation factor IIA subunit 2. (63 aa)
Polr2mProtein GRINL1A. (366 aa)
MyzapGRINL1A complex locus protein 1. (466 aa)
Leo1RNA polymerase-associated protein LEO1. (760 aa)
Taf3Transcription initiation factor TFIID subunit 3. (930 aa)
CgPICR_016137TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (148 aa)
I79_024513TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (223 aa)
Taf1Transcription initiation factor TFIID subunit 1. (489 aa)
I79_024319Transcriptional adapter 3-like. (87 aa)
Polr1fDNA-directed RNA polymerase I subunit RPA43. (169 aa)
Pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (600 aa)
I79_023511DNA-directed RNA polymerase III subunit RPC8. (175 aa)
Polr3eDNA-directed RNA polymerase III subunit RPC5. (611 aa)
I79_022460Transcription initiation factor TFIID subunit 2. (125 aa)
I79_022459Transcription initiation factor TFIID subunit 2. (62 aa)
I79_022457Transcription initiation factor TFIID subunit 2. (89 aa)
CrcpDNA-directed RNA polymerase III subunit RPC9-like protein. (215 aa)
Taf10Transcription initiation factor TFIID subunit 10. (125 aa)
Taf13Transcription initiation factor TFIID subunit 13-like protein. (124 aa)
CgPICR_018060DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
I79_020821Transcription initiation factor TFIID subunit 5. (416 aa)
Tbpl1TATA box-binding protein-like protein 1. (186 aa)
Polr1aDNA-directed RNA polymerase I subunit RPA1. (980 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (807 aa)
I79_019487Transcription initiation factor TFIID subunit 1. (173 aa)
Polr2dDNA-directed RNA polymerase II subunit RPB4. (104 aa)
CgPICR_017319DNA-directed RNA polymerases I, II, and III subunit RPABC5. (77 aa)
Taf6Transcription initiation factor TFIID subunit 6. (678 aa)
Polr2fDNA-directed RNA polymerases I, II, and III subunit RPABC2. (121 aa)
Gtf2bTranscription initiation factor IIB. (285 aa)
Polr2cDNA-directed RNA polymerase II subunit RPB3. (275 aa)
Polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (109 aa)
Polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
Gtf2h1General transcription factor IIH subunit 1. (547 aa)
Myo6Myosin-VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (812 aa)
I79_016946Myosin-VI. (443 aa)
Prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (507 aa)
Polr1cDNA-directed RNA polymerases I and III subunit RPAC1. (282 aa)
Ctr9RNA polymerase-associated protein CTR9-like. (1171 aa)
I79_016081DNA polymerase. (1016 aa)
Taf7Transcription initiation factor TFIID subunit 7. (341 aa)
I79_016019Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family. (950 aa)
TrrapTransformation/transcription domain-associated protein. (1999 aa)
Gtf2h3General transcription factor IIH subunit 3. (313 aa)
Polr1hDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
Cdc73Parafibromin. (164 aa)
I79_014650Parafibromin. (260 aa)
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
I79_014323ATP-dependent DNA helicase Q5. (409 aa)
I79_013985Transcription elongation factor A protein 1. (278 aa)
Taf11Transcription initiation factor TFIID subunit 11. (106 aa)
Cdk7Cell division protein kinase 7; Belongs to the protein kinase superfamily. (346 aa)
Taf9Transcription initiation factor TFIID subunit 9. (260 aa)
I79_013580General transcription factor IIH subunit. (395 aa)
Prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
Taf8Transcription initiation factor TFIID subunit 8. (308 aa)
Pex2Peroxisome assembly factor 1. (334 aa)
Gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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