STRINGSTRING
Got1 Got1 Neurog3 Neurog3 Mef2c Mef2c Lif Lif Smad3 Smad3 Cd34 Cd34 Tbx5 Tbx5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Got1Aspartate aminotransferase. (413 aa)
Neurog3Neurogenin-3. (214 aa)
Mef2cMyocyte-specific enhancer factor 2C. (465 aa)
LifLeukemia inhibitory factor-like protein. (158 aa)
Smad3Mothers against decapentaplegic homolog. (363 aa)
Cd34Hematopoietic progenitor cell antigen CD34. (383 aa)
Tbx5T-box transcription factor TBX5. (518 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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