STRINGSTRING
Wnt5a Wnt5a Mmp12 Mmp12 I79_007070 I79_007070 I79_007301 I79_007301 Ikbke Ikbke I79_007841 I79_007841 I79_010477 I79_010477 I79_025191 I79_025191 I79_023356 I79_023356 I79_023355 I79_023355 I79_023218 I79_023218 I79_022189 I79_022189 Ube2k Ube2k I79_019922 I79_019922 H671_3g9402 H671_3g9402 Rnf185 Rnf185 I79_017064 I79_017064 I79_015466 I79_015466 Sting1 Sting1 Fadd Fadd Usp27x Usp27x I79_011011 I79_011011
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Wnt5aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (330 aa)
Mmp12Macrophage metalloelastase. (464 aa)
I79_007070Serine/threonine-protein kinase TBK1. (271 aa)
I79_007301Tripartite motif-containing protein 56. (1274 aa)
IkbkeInhibitor of nuclear factor kappa-B kinase subunit epsilon. (640 aa)
I79_007841Z-DNA-binding protein 1. (235 aa)
I79_010477Protein NLRC5. (1513 aa)
I79_025191Tripartite motif-containing protein 6. (212 aa)
I79_023356Ubiquitin carboxyl-terminal hydrolase 29; Belongs to the peptidase C19 family. (325 aa)
I79_023355Ubiquitin carboxyl-terminal hydrolase 29; Belongs to the peptidase C19 family. (535 aa)
I79_023218Interferon regulatory factor 3. (377 aa)
I79_022189Tripartite motif-containing protein 6. (488 aa)
Ube2kUbiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
I79_019922Serine/threonine-protein kinase TBK1. (421 aa)
H671_3g9402Interferon regulatory factor 7. (473 aa)
Rnf185RING finger protein 185. (134 aa)
I79_017064Tripartite motif-containing protein 6. (58 aa)
I79_015466Ubiquitin carboxyl-terminal hydrolase 27. (176 aa)
Sting1Transmembrane protein 173. (315 aa)
FaddFAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. (208 aa)
Usp27xUbiquitin carboxyl-terminal hydrolase 27; Belongs to the peptidase C19 family. (438 aa)
I79_011011E3 ubiquitin-protein ligase TRIM 41. (258 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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