STRINGSTRING
Ext1 Ext1 Poc1a Poc1a Axin2 Axin2 I79_006126 I79_006126 I79_005451 I79_005451 Rarb Rarb I79_005213 I79_005213 I79_005088 I79_005088 I79_021786 I79_021786 I79_000973 I79_000973 Col9a1 Col9a1 I79_001476 I79_001476 Stc1 Stc1 Tgfbr2 Tgfbr2 I79_003264 I79_003264 Atf2 Atf2 Matn1 Matn1 Smpd3 Smpd3 Nppc Nppc I79_024611 I79_024611 Trip11 Trip11 Col2a1 Col2a1 Serpinh1 Serpinh1 Ghr Ghr Ift80 Ift80 Sik3 Sik3 I79_018785 I79_018785 I79_016814 I79_016814 Ihh Ihh Rarg Rarg Cbs Cbs I79_011333 I79_011333 Col1a1 Col1a1 Hspg2 Hspg2 Trpv4 Trpv4 Col27a1 Col27a1 Thbs1 Thbs1 Hoxa11 Hoxa11 Zmpste24 Zmpste24 Cer1 Cer1 Thbs3 Thbs3 I79_025697 I79_025697
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ext1Exostosin-1. (388 aa)
Poc1aWD repeat-containing protein 51A. (78 aa)
Axin2Axin-2. (809 aa)
I79_006126Cystatin-D. (100 aa)
I79_005451Annexin. (676 aa)
RarbRetinoic acid receptor beta. (284 aa)
I79_005213Nuclear receptor domain-containing protein. (162 aa)
I79_005088Cartilage oligomeric matrix protein. (585 aa)
I79_021786Collagen alpha-1(II) chain. (689 aa)
I79_000973Transcription factor SOX-10. (360 aa)
Col9a1Collagen alpha-1(IX) chain. (364 aa)
I79_001476Collagenase 3. (300 aa)
Stc1Stanniocalcin-1. (247 aa)
Tgfbr2TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (592 aa)
I79_003264WD repeat-containing protein 51A. (193 aa)
Atf2Cyclic AMP-dependent transcription factor ATF-2. (487 aa)
Matn1Cartilage matrix protein. (461 aa)
Smpd3Sphingomyelin phosphodiesterase 3. (446 aa)
NppcC-type natriuretic peptide. (126 aa)
I79_024611Signal peptide, CUB and EGF-like domain-containing protein 2. (583 aa)
Trip11Thyroid receptor-interacting protein 11. (1977 aa)
Col2a1Collagen alpha-1(II) chain. (709 aa)
Serpinh1Serpin H1; Belongs to the serpin family. (417 aa)
GhrGrowth hormone receptor. (345 aa)
Ift80Intraflagellar transport protein 80-like. (366 aa)
Sik3Serine/threonine-protein kinase QSK. (1252 aa)
I79_018785Retinoic acid receptor alpha. (484 aa)
I79_016814Short stature homeobox protein 2. (194 aa)
IhhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (918 aa)
RargRetinoic acid receptor gamma. (458 aa)
CbsCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (561 aa)
I79_011333Sphingomyelin phosphodiesterase 3. (410 aa)
Col1a1Collagen alpha-1(I) chain. (355 aa)
Hspg2Basement membrane-specific heparan sulfate proteoglycan core protein. (3140 aa)
Trpv4Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family. (870 aa)
Col27a1Collagen alpha-1(XXVII) chain. (167 aa)
Thbs1Thrombospondin-1. (533 aa)
Hoxa11Homeobox protein Hox-A11. (250 aa)
Zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (475 aa)
Cer1Cerberus. (272 aa)
Thbs3Thrombospondin-3. (956 aa)
I79_025697Intraflagellar transport protein 80-like. (113 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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