STRINGSTRING
I79_022078 I79_022078 Rbbp9 Rbbp9 Aimp2 Aimp2 I79_001484 I79_001484 Spdef Spdef Agr2 Agr2 I79_014474 I79_014474 Ncor2 Ncor2 Foxa2 Foxa2 Foxp4 Foxp4 Thra Thra Foxa1 Foxa1 Rbpj Rbpj Sav1 Sav1 Thrb Thrb I79_023429 I79_023429 I79_023436 I79_023436 I79_025679 I79_025679 I79_025680 I79_025680 I79_025880 I79_025880 Foxp1 Foxp1 I79_000973 I79_000973 H671_2g5863 H671_2g5863 I79_011377 I79_011377 Ppp3r1 Ppp3r1 Nfib Nfib I79_007819 I79_007819 Fndc3b Fndc3b Igf1 Igf1 Ascl1 Ascl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_022078Homeobox protein Nkx-2.1. (190 aa)
Rbbp9Putative hydrolase RBBP9. (186 aa)
Aimp2Aminoacyl tRNA synthetase complex-interacting multifunctional protein 2. (320 aa)
I79_00148465 kDa Yes-associated protein. (257 aa)
SpdefSAM pointed domain-containing Ets transcription factor. (325 aa)
Agr2Anterior gradient protein 2-like. (173 aa)
I79_014474Cyclic AMP-responsive element-binding protein 1. (325 aa)
Ncor2Nuclear receptor corepressor 2. (2530 aa)
Foxa2Hepatocyte nuclear factor 3-beta. (430 aa)
Foxp4Forkhead box protein P4. (685 aa)
ThraThyroid hormone receptor alpha. (493 aa)
Foxa1Hepatocyte nuclear factor 3-alpha. (434 aa)
RbpjRecombining binding protein suppressor of hairless-like protein. (486 aa)
Sav1Protein salvador-like 1. (210 aa)
ThrbThyroid hormone receptor beta. (377 aa)
I79_023429Forkhead box protein P4. (631 aa)
I79_023436Forkhead box protein P4. (104 aa)
I79_025679Forkhead box protein P4. (346 aa)
I79_025680Forkhead box protein P4. (206 aa)
I79_025880Thyroid hormone receptor alpha. (77 aa)
Foxp1Forkhead box protein P1. (696 aa)
I79_000973Transcription factor SOX-10. (360 aa)
H671_2g5863Trimeric intracellular cation channel type B-like protein. (176 aa)
I79_011377Grainyhead-like protein 2-like. (522 aa)
Ppp3r1Calcineurin subunit B type 1-like protein. (165 aa)
NfibNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (561 aa)
I79_007819Leukotriene A-4 hydrolase. (529 aa)
Fndc3bFibronectin type III domain-containing protein 3B. (1203 aa)
Igf1Insulin-like growth factor I. (75 aa)
Ascl1Achaete-scute-like 1. (140 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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