STRINGSTRING
Wnt4 Wnt4 Dlx3 Dlx3 Ascl1 Ascl1 B9d1 B9d1 Jag1 Jag1 I79_015503 I79_015503 Npm3 Npm3 I79_017833 I79_017833 I79_018181 I79_018181 Kdm2a Kdm2a Tmem231 Tmem231 I79_019149 I79_019149 Lhx3 Lhx3 Abl1 Abl1 Bccip Bccip Dspp Dspp Gata2 Gata2 Abl2 Abl2 I79_014914 I79_014914 Wnt11 Wnt11 Fam20c Fam20c Tubb Tubb Dll1 Dll1 I79_011045 I79_011045 Map1b Map1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Wnt4Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (288 aa)
Dlx3Homeobox protein DLX-3. (287 aa)
Ascl1Achaete-scute-like 1. (140 aa)
B9d1B9 domain-containing protein 1. (84 aa)
Jag1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1186 aa)
I79_015503Transcription factor HES-1. (92 aa)
Npm3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (337 aa)
I79_017833Lymphoid enhancer-binding factor 1. (276 aa)
I79_018181Lysine-specific demethylase 2A. (122 aa)
Kdm2aLysine-specific demethylase 2A. (977 aa)
Tmem231UPF0513 transmembrane protein. (315 aa)
I79_019149Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (132 aa)
Lhx3LIM/homeobox protein Lhx3. (403 aa)
Abl1Tyrosine-protein kinase transforming protein Abl. (322 aa)
BccipBRCA2 and CDKN1A-interacting protein; May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ); Belongs to the BCP1 family. (313 aa)
DsppDentin sialophosphoprotein. (859 aa)
Gata2Endothelial transcription factor GATA-2. (480 aa)
Abl2Tyrosine-protein kinase. (1167 aa)
I79_014914Cadherin-2; Cadherins are calcium-dependent cell adhesion proteins. (756 aa)
Wnt11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
Fam20cDentin matrix protein 4. (776 aa)
TubbTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
Dll1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (741 aa)
I79_011045Afadin. (1605 aa)
Map1bMicrotubule-associated protein 1B. (2371 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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