STRINGSTRING
Sox15 Sox15 I79_023578 I79_023578 I79_023577 I79_023577 Lif Lif I79_016918 I79_016918 Prdm1 Prdm1 E2f7 E2f7 Plk4 Plk4 I79_011258 I79_011258 I79_009796 I79_009796 Snai1 Snai1 E2f8 E2f8 Gjb5 Gjb5 Hectd1 Hectd1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sox15Protein SOX-15. (149 aa)
I79_023578Cathepsin R; Belongs to the peptidase C1 family. (333 aa)
I79_023577Cathepsin R; Belongs to the peptidase C1 family. (333 aa)
LifLeukemia inhibitory factor-like protein. (158 aa)
I79_016918ETS domain-containing transcription factor ERF. (58 aa)
Prdm1PR domain zinc finger protein 1. (825 aa)
E2f7Transcription factor E2F7. (900 aa)
Plk4Serine/threonine-protein kinase PLK4. (928 aa)
I79_011258Sentrin-specific protease 2. (314 aa)
I79_009796Plasminogen; Belongs to the peptidase S1 family. Plasminogen subfamily. (697 aa)
Snai1Zinc finger protein SNAI1-like protein. (264 aa)
E2f8Transcription factor E2F8. (867 aa)
Gjb5Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (271 aa)
Hectd1E3 ubiquitin-protein ligase HECTD1. (2610 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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