(26 nodes) Left/right pattern formation network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I79_025691	Uncharacterized protein. (194 aa)
	Pitx2	Homeobox protein. (322 aa)
	Dpcd	Protein DPCD. (203 aa)
	Tmem145	Multiple epidermal growth factor-like domains 8. (2639 aa)
	Cluap1	Clusterin-associated protein 1. (238 aa)
	Mns1	Meiosis-specific nuclear structural protein 1. (489 aa)
	I79_000275	Dynein assembly factor 1, axonemal. (437 aa)
	Ahi1	Jouberin. (988 aa)
	Ift172	Intraflagellar transport protein 172-like. (1340 aa)
	Arl13b	ADP-ribosylation factor-like protein 13B. (422 aa)
	Smo	Smoothened-like; Belongs to the G-protein coupled receptor Fz/Smo family. (984 aa)
	Epb41l5	Band 4.1-like protein 5. (717 aa)
	I79_005961	Zinc finger protein ZIC 3. (89 aa)
	Ift57	Intraflagellar transport protein 57-like. (296 aa)
	I79_007135	Homeobox protein Nkx-2.5. (223 aa)
	I79_008481	Intraflagellar transport protein 57-like. (162 aa)
	Snai1	Zinc finger protein SNAI1-like protein. (264 aa)
	Dll1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (741 aa)
	Notch2	Neurogenic locus notch-like protein 2. (1521 aa)
	Invs	Inversin. (1054 aa)
	Foxj1	Forkhead box protein J1. (421 aa)
	Ift122	Intraflagellar transport protein 122-like. (292 aa)
	I79_015223	Neurogenic locus notch-like protein 2. (248 aa)
	I79_015888	Polycystic kidney disease protein 1-like 1. (1663 aa)
	Nme7	Nucleoside diphosphate kinase 7; Belongs to the NDK family. (160 aa)
	I79_016697	Clusterin-associated protein 1. (172 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ahi1	Arl13b	G3GW72	G3GYG1	Jouberin.	ADP-ribosylation factor-like protein 13B.	0.709
Ahi1	Invs	G3GW72	G3HRG6	Jouberin.	Inversin.	0.610
Arl13b	Ahi1	G3GYG1	G3GW72	ADP-ribosylation factor-like protein 13B.	Jouberin.	0.709
Arl13b	Ift172	G3GYG1	G3GWA1	ADP-ribosylation factor-like protein 13B.	Intraflagellar transport protein 172-like.	0.483
Arl13b	Ift57	G3GYG1	G3H7C5	ADP-ribosylation factor-like protein 13B.	Intraflagellar transport protein 57-like.	0.442
Arl13b	Invs	G3GYG1	G3HRG6	ADP-ribosylation factor-like protein 13B.	Inversin.	0.512
Arl13b	Smo	G3GYG1	G3GZ55	ADP-ribosylation factor-like protein 13B.	Smoothened-like; Belongs to the G-protein coupled receptor Fz/Smo family.	0.631
Cluap1	I79_008481	G3I032	G3HDA2	Clusterin-associated protein 1.	Intraflagellar transport protein 57-like.	0.879
Cluap1	I79_016697	G3I032	G3I031	Clusterin-associated protein 1.	Clusterin-associated protein 1.	0.926
Cluap1	Ift122	G3I032	G3HVL8	Clusterin-associated protein 1.	Intraflagellar transport protein 122-like.	0.697
Cluap1	Ift172	G3I032	G3GWA1	Clusterin-associated protein 1.	Intraflagellar transport protein 172-like.	0.924
Cluap1	Ift57	G3I032	G3H7C5	Clusterin-associated protein 1.	Intraflagellar transport protein 57-like.	0.879
Dll1	I79_015223	G3HNT7	G3HW73	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Neurogenic locus notch-like protein 2.	0.832
Dll1	Notch2	G3HNT7	G3HP78	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Neurogenic locus notch-like protein 2.	0.978
Foxj1	Pitx2	G3HTX0	G3IHV5	Forkhead box protein J1.	Homeobox protein.	0.504
I79_008481	Cluap1	G3HDA2	G3I032	Intraflagellar transport protein 57-like.	Clusterin-associated protein 1.	0.879
I79_008481	I79_016697	G3HDA2	G3I031	Intraflagellar transport protein 57-like.	Clusterin-associated protein 1.	0.879
I79_008481	Ift122	G3HDA2	G3HVL8	Intraflagellar transport protein 57-like.	Intraflagellar transport protein 122-like.	0.780
I79_008481	Ift172	G3HDA2	G3GWA1	Intraflagellar transport protein 57-like.	Intraflagellar transport protein 172-like.	0.970
I79_008481	Ift57	G3HDA2	G3H7C5	Intraflagellar transport protein 57-like.	Intraflagellar transport protein 57-like.	0.942