STRINGSTRING
Ctdp1 Ctdp1 I79_023178 I79_023178 Pak1 Pak1 I79_011152 I79_011152 Tomm70 Tomm70 Gsk3a Gsk3a G6pd G6pd I79_022390 I79_022390 Ppara Ppara Foxp1 Foxp1 Cav3 Cav3 Rgs2 Rgs2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ctdp1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (848 aa)
I79_023178Zinc finger protein 551. (887 aa)
Pak1Serine/threonine-protein kinase PAK 1. (325 aa)
I79_011152Peptidase inhibitor 16; Belongs to the CRISP family. (396 aa)
Tomm70Mitochondrial import receptor subunit TOM70. (384 aa)
Gsk3aGlycogen synthase kinase-3 alpha. (653 aa)
G6pdGlucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. (624 aa)
I79_022390Peroxisome proliferator-activated receptor alpha. (110 aa)
PparaPeroxisome proliferator-activated receptor alpha. (393 aa)
Foxp1Forkhead box protein P1. (696 aa)
Cav3Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
Rgs2Regulator of G-protein signaling 2. (207 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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