STRINGSTRING
Smyd3 Smyd3 Taf3 Taf3 I79_000020 I79_000020 I79_000030 I79_000030 Gtf2a2 Gtf2a2 Cdt1 Cdt1 I79_000274 I79_000274 I79_000682 I79_000682 YPEL YPEL I79_000973 I79_000973 CgPICR_012940 CgPICR_012940 Cenpv Cenpv I79_001817 I79_001817 I79_002183 I79_002183 Kat6b Kat6b Taf4 Taf4 I79_002238 I79_002238 I79_002264 I79_002264 Cenpx Cenpx Cenpa Cenpa Mis12 Mis12 Med30 Med30 Oip5 Oip5 I79_003878 I79_003878 I79_003879 I79_003879 I79_003949 I79_003949 Brf2 Brf2 Taf12 Taf12 MED18 MED18 CgPICR_014462 CgPICR_014462 CgPICR_009863 CgPICR_009863 CgPICR_014458 CgPICR_014458 Pogz Pogz H671_5g13732 H671_5g13732 I79_005256 I79_005256 I79_005272 I79_005272 Smarca4 Smarca4 I79_006049 I79_006049 I79_006166 I79_006166 I79_006241 I79_006241 Dlgap5 Dlgap5 I79_006289 I79_006289 I79_006368 I79_006368 I79_006416 I79_006416 Mcm2 Mcm2 Gtf2f2 Gtf2f2 Rad52 Rad52 Hells Hells Chaf1a Chaf1a I79_008257 I79_008257 Asf1b Asf1b I79_008687 I79_008687 I79_008690 I79_008690 I79_008693 I79_008693 I79_008696 I79_008696 I79_008698 I79_008698 I79_008702 I79_008702 CgPICR_009874 CgPICR_009874 H1-6 H1-6 I79_008705 I79_008705 CgPICR_009866 CgPICR_009866 I79_008709 I79_008709 I79_008713 I79_008713 I79_008714 I79_008714 H1-1 H1-1 I79_008720 I79_008720 Gmnn Gmnn I79_008812 I79_008812 Dr1 Dr1 I79_008990 I79_008990 I79_008991 I79_008991 Cdc45 Cdc45 MED8 MED8 Rrn3 Rrn3 I79_009458 I79_009458 Gtf2h5 Gtf2h5 Kat6a Kat6a I79_010126 I79_010126 I79_010560 I79_010560 I79_010912 I79_010912 Tspyl1 Tspyl1 Tspyl4 Tspyl4 I79_010992 I79_010992 I79_011260 I79_011260 Cenpt Cenpt I79_011357 I79_011357 I79_011588 I79_011588 Polr1e Polr1e I79_011986 I79_011986 Magt1 Magt1 Cenpp Cenpp I79_012708 I79_012708 I79_012822 I79_012822 H1-5 H1-5 I79_012828 I79_012828 CgPICR_009875 CgPICR_009875 I79_012926 I79_012926 Brd2 Brd2 Taf8 Taf8 Baz2a Baz2a Cenph Cenph I79_013613 I79_013613 Taf11 Taf11 Tcf4 Tcf4 Nap1l1 Nap1l1 I79_014280 I79_014280 I79_014313 I79_014313 I79_014329 I79_014329 I79_014809 I79_014809 I79_014844 I79_014844 I79_014984 I79_014984 I79_015018 I79_015018 I79_015637 I79_015637 Cenpk Cenpk I79_015720 I79_015720 Chaf1b Chaf1b Shprh Shprh Smarcb1 Smarcb1 Taf7 Taf7 Rad51 Rad51 Dicer1 Dicer1 I79_016664 I79_016664 H671_7g18515 H671_7g18515 Cenpn Cenpn I79_016941 I79_016941 Spty2d1 Spty2d1 Taf1b Taf1b Dnajc9 Dnajc9 I79_018034 I79_018034 I79_018037 I79_018037 I79_018217 I79_018217 Gtf2b Gtf2b Hp1bp3 Hp1bp3 I79_018405 I79_018405 CgPICR_015008 CgPICR_015008 I79_018682 I79_018682 Taf6 Taf6 Asf1a Asf1a Hnf1b Hnf1b I79_019109 I79_019109 I79_019132 I79_019132 Nap1l5 Nap1l5 Daxx Daxx Chrac1 Chrac1 Baz1a Baz1a I79_020283 I79_020283 I79_020385 I79_020385 I79_020821 I79_020821 Hey2 Hey2 CgPICR_009887 CgPICR_009887 Grwd1 Grwd1 I79_021102 I79_021102 Taf13 Taf13 I79_021340 I79_021340 Taf10 Taf10 Hjurp Hjurp I79_022457 I79_022457 I79_022459 I79_022459 I79_022460 I79_022460 Nap1l2 Nap1l2 I79_023255 I79_023255 I79_023440 I79_023440 I79_023444 I79_023444 I79_023449 I79_023449 I79_023605 I79_023605 I79_023638 I79_023638 I79_023761 I79_023761 Tspyl2 Tspyl2 I79_024150 I79_024150 I79_024304 I79_024304 I79_024984 I79_024984 I79_025003 I79_025003 I79_025229 I79_025229 I79_025663 I79_025663 I79_025665 I79_025665 H671_2g5756 H671_2g5756 I79_025902 I79_025902
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smyd3SET and MYND domain-containing protein 3. (239 aa)
Taf3Transcription initiation factor TFIID subunit 3. (930 aa)
I79_000020Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (151 aa)
I79_000030Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (148 aa)
Gtf2a2Transcription initiation factor IIA subunit 2. (63 aa)
Cdt1DNA replication factor Cdt1. (553 aa)
I79_000274TATA box-binding protein-associated factor, RNA polymerase I, subunit C. (848 aa)
I79_000682Histone H3.3. (136 aa)
YPELProtein yippee-like; Belongs to the yippee family. (141 aa)
I79_000973Transcription factor SOX-10. (360 aa)
CgPICR_012940Acidic leucine-rich nuclear phosphoprotein 32 family member B-like protein. (109 aa)
CenpvCentromere protein V. (151 aa)
I79_001817Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (163 aa)
I79_002183Histone acetyltransferase MYST4. (709 aa)
Kat6bHistone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1253 aa)
Taf4Transcription initiation factor TFIID subunit 4. (630 aa)
I79_002238Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (269 aa)
I79_002264Histone H3.3 type 1. (138 aa)
CenpxCentromere protein X. (104 aa)
CenpaHistone H3-like centromeric protein A. (129 aa)
Mis12Protein MIS12-like. (206 aa)
Med30Mediator of RNA polymerase II transcription subunit 30. (73 aa)
Oip5Protein Mis18-beta. (221 aa)
I79_003878Histone H2A; Belongs to the histone H2A family. (242 aa)
I79_003879Core histone macro-H2A.1. (155 aa)
I79_003949Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (262 aa)
Brf2Transcription factor IIIB 50 kDa subunit. (416 aa)
Taf12Transcription initiation factor TFIID subunit 12. (161 aa)
MED18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (208 aa)
CgPICR_014462Histone H2B; Belongs to the histone H2B family. (126 aa)
CgPICR_009863Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CgPICR_014458Histone H2B; Belongs to the histone H2B family. (126 aa)
PogzPogo transposable element with ZNF domain isoform 1. (1411 aa)
H671_5g13732Transcription factor TFIIB containing protein. (416 aa)
I79_005256Uncharacterized protein. (224 aa)
I79_005272Transcription initiation factor TFIID subunit 7-like. (384 aa)
Smarca4Putative global transcription activator SNF2L4. (1614 aa)
I79_006049Core histone macro-H2A.2. (393 aa)
I79_006166Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (123 aa)
I79_006241Disks large-associated protein 5. (278 aa)
Dlgap5Disks large-associated protein 5. (564 aa)
I79_006289Acidic leucine-rich nuclear phosphoprotein 32 family member B. (213 aa)
I79_006368SET and MYND domain-containing protein 3. (87 aa)
I79_006416Histone H3.3. (117 aa)
Mcm2DNA helicase; Belongs to the MCM family. (905 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
Rad52DNA repair protein RAD52-like. (419 aa)
HellsLymphocyte-specific helicase. (784 aa)
Chaf1aChromatin assembly factor 1 subunit A. (887 aa)
I79_008257Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (184 aa)
Asf1bHistone chaperone ASF1B-like protein. (202 aa)
I79_008687Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (134 aa)
I79_008690Histone H2B; Belongs to the histone H2B family. (67 aa)
I79_008693Histone H1.3. (207 aa)
I79_008696Histone H2B; Belongs to the histone H2B family. (139 aa)
I79_008698Histone H3; Belongs to the histone H3 family. (141 aa)
I79_008702Histone H2A type 1; Belongs to the histone H2A family. (331 aa)
CgPICR_009874Histone H2B; Belongs to the histone H2B family. (126 aa)
H1-6Histone H1t. (150 aa)
I79_008705Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CgPICR_009866HIST1H1D. (212 aa)
I79_008709Histone H2B; Belongs to the histone H2B family. (126 aa)
I79_008713Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (98 aa)
I79_008714Histone H3; Belongs to the histone H3 family. (136 aa)
H1-1Histone H1.1. (213 aa)
I79_008720Histone H2B; Belongs to the histone H2B family. (127 aa)
GmnnGeminin. (202 aa)
I79_008812Centromere protein O. (173 aa)
Dr1Protein Dr1. (176 aa)
I79_008990Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (223 aa)
I79_008991Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (209 aa)
Cdc45CDC45-related protein. (282 aa)
MED8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (268 aa)
Rrn3RNA polymerase I-specific transcription initiation factor RRN3. (224 aa)
I79_009458Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (138 aa)
Gtf2h5General transcription factor IIH subunit 5. (71 aa)
Kat6aHistone acetyltransferase MYST3. (200 aa)
I79_010126Histone H3.1t. (320 aa)
I79_010560Transcription factor TFIIIB component B''-like. (2228 aa)
I79_010912Spermatid-specific linker histone H1-like protein. (174 aa)
Tspyl1Testis-specific Y-encoded-like protein 1; Belongs to the nucleosome assembly protein (NAP) family. (227 aa)
Tspyl4Testis-specific Y-encoded-like protein 4; Belongs to the nucleosome assembly protein (NAP) family. (409 aa)
I79_010992Histone H2B type 1; Belongs to the histone H2B family. (126 aa)
I79_011260Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (380 aa)
CenptCentromere protein T. (388 aa)
I79_011357Centromere protein T. (89 aa)
I79_011588Nucleolar transcription factor 1. (727 aa)
Polr1eDNA-directed RNA polymerase I subunit RPA49. (434 aa)
I79_011986Protein SET. (96 aa)
Magt1Transcriptional regulator ATRX. (2344 aa)
CenppCentromere protein P. (139 aa)
I79_012708Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (108 aa)
I79_012822Histone H2B; Belongs to the histone H2B family. (126 aa)
H1-5Histone H1.5. (222 aa)
I79_012828Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (199 aa)
CgPICR_009875Histone H3; Belongs to the histone H3 family. (136 aa)
I79_012926Death domain-associated protein 6. (393 aa)
Brd2Bromodomain-containing protein 2. (752 aa)
Taf8Transcription initiation factor TFIID subunit 8. (308 aa)
Baz2aBromodomain adjacent to zinc finger domain protein 2A. (1874 aa)
CenphCentromere protein H. (248 aa)
I79_013613SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1166 aa)
Taf11Transcription initiation factor TFIID subunit 11. (106 aa)
Tcf4Transcription factor 4. (632 aa)
Nap1l1Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family. (231 aa)
I79_014280Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (102 aa)
I79_014313Nucleosome assembly protein 1-like 3; Belongs to the nucleosome assembly protein (NAP) family. (529 aa)
I79_014329Histone H3.3. (102 aa)
I79_014809Histone H3.3 type 1. (89 aa)
I79_014844Histone H3.3. (140 aa)
I79_014984Squamous cell carcinoma antigen recognized by T-cells 3. (803 aa)
I79_015018Histone H1oo. (285 aa)
I79_015637Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (193 aa)
CenpkCentromere protein K. (270 aa)
I79_015720Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (252 aa)
Chaf1bChromatin assembly factor 1 subunit B. (476 aa)
ShprhE3 ubiquitin-protein ligase SHPRH. (1676 aa)
Smarcb1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (348 aa)
Taf7Transcription initiation factor TFIID subunit 7. (341 aa)
Rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
Dicer1Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1907 aa)
I79_016664PIH1 domain-containing protein 1. (280 aa)
H671_7g18515N-acetyltransferase 15-like protein. (276 aa)
CenpnCentromere protein N. (419 aa)
I79_016941Histone H3.3. (114 aa)
Spty2d1Protein SPT2-like. (684 aa)
Taf1bTATA box-binding protein-associated factor RNA polymerase I subunit B. (258 aa)
Dnajc9DnaJ-like subfamily C member 9. (317 aa)
I79_018034Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (152 aa)
I79_018037RNA polymerase I-specific transcription initiation factor RRN3. (202 aa)
I79_018217Histone H2B type 2-F; Belongs to the histone H2B family. (73 aa)
Gtf2bTranscription initiation factor IIB. (285 aa)
Hp1bp3Heterochromatin protein 1-binding protein 3. (561 aa)
I79_018405Histone H2B type F-M; Belongs to the histone H2B family. (138 aa)
CgPICR_015008Histone H1.0. (194 aa)
I79_018682Remodeling and spacing factor 1. (1308 aa)
Taf6Transcription initiation factor TFIID subunit 6. (678 aa)
Asf1aHistone chaperone ASF1A. (75 aa)
Hnf1bHepatocyte nuclear factor 1-beta. (593 aa)
I79_019109Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (134 aa)
I79_019132Histone acetyltransferase MYST4. (141 aa)
Nap1l5Nucleosome assembly protein 1-like 5; Belongs to the nucleosome assembly protein (NAP) family. (231 aa)
DaxxDeath domain-associated protein 6. (708 aa)
Chrac1Chromatin accessibility complex protein 1. (130 aa)
Baz1aBromodomain adjacent to zinc finger domain protein 1A. (1525 aa)
I79_020283Uncharacterized protein. (94 aa)
I79_020385Protein SET; Belongs to the nucleosome assembly protein (NAP) family. (238 aa)
I79_020821Transcription initiation factor TFIID subunit 5. (416 aa)
Hey2Hairy/enhancer-of-split related with YRPW motif protein 2. (276 aa)
CgPICR_009887Histone H2B; Belongs to the histone H2B family. (126 aa)
Grwd1Glutamate-rich WD repeat-containing protein 1. (445 aa)
I79_021102Histone H1.0. (178 aa)
Taf13Transcription initiation factor TFIID subunit 13-like protein. (124 aa)
I79_021340Uncharacterized protein C8orf45-like. (305 aa)
Taf10Transcription initiation factor TFIID subunit 10. (125 aa)
HjurpHolliday junction recognition protein. (658 aa)
I79_022457Transcription initiation factor TFIID subunit 2. (89 aa)
I79_022459Transcription initiation factor TFIID subunit 2. (62 aa)
I79_022460Transcription initiation factor TFIID subunit 2. (125 aa)
Nap1l2Nucleosome assembly protein 1-like 2; Belongs to the nucleosome assembly protein (NAP) family. (463 aa)
I79_023255Protein Mis18-beta. (61 aa)
I79_023440Histone H2A; Belongs to the histone H2A family. (119 aa)
I79_023444Centromere protein S. (71 aa)
I79_023449Acidic leucine-rich nuclear phosphoprotein 32 family member B. (162 aa)
I79_023605Histone H3.3. (136 aa)
I79_023638Centromere-associated protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (2379 aa)
I79_023761Nucleosome assembly protein 1-like 4; Belongs to the nucleosome assembly protein (NAP) family. (345 aa)
Tspyl2Testis-specific Y-encoded-like protein 2; Belongs to the nucleosome assembly protein (NAP) family. (622 aa)
I79_024150Protein-arginine deiminase type-4. (342 aa)
I79_024304Protein Dr1. (319 aa)
I79_024984Histone H2A; Belongs to the histone H2A family. (119 aa)
I79_025003Upstream-binding factor 1-like protein 1. (349 aa)
I79_025229Upstream-binding factor 1-like protein 1. (329 aa)
I79_025663Protein-arginine deiminase type-4. (230 aa)
I79_025665Histone H2B; Belongs to the histone H2B family. (126 aa)
H671_2g5756Histone H2B subacrosomal variant-like protein; Belongs to the histone H2B family. (121 aa)
I79_025902DNA replication licensing factor MCM2. (182 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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