STRINGSTRING
Zc3h8 Zc3h8 I79_023244 I79_023244 Blm Blm I79_021840 I79_021840 Adam8 Adam8 Hif1a Hif1a Nfkbid Nfkbid I79_012741 I79_012741 Ada Ada Bcl11b Bcl11b Efna1 Efna1 I79_006254 I79_006254 Jak3 Jak3 I79_005129 I79_005129 Vhl Vhl Wnt5a Wnt5a Casp8 Casp8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Zc3h8Zinc finger CCCH domain-containing protein 8. (306 aa)
I79_023244Bloom syndrome protein-like. (721 aa)
BlmATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (464 aa)
I79_021840Nuclear receptor ROR-gamma. (341 aa)
Adam8Disintegrin and metalloproteinase domain-containing protein 8. (936 aa)
Hif1aHypoxia-inducible factor 1 alpha. (820 aa)
NfkbidNF-kappa-B inhibitor delta. (74 aa)
I79_012741Kinesin-associated protein 3. (610 aa)
AdaAdenosine deaminase. (363 aa)
Bcl11bB-cell lymphoma/leukemia 11B. (812 aa)
Efna1Ephrin-A1; Belongs to the ephrin family. (205 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
Jak3Tyrosine-protein kinase JAK3. (222 aa)
I79_005129Tyrosine-protein kinase JAK3. (330 aa)
VhlVon Hippel-Lindau disease tumor suppressor. (134 aa)
Wnt5aProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (330 aa)
Casp8Caspase-8; Belongs to the peptidase C14A family. (481 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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