STRINGSTRING
Atf4 Atf4 I79_021789 I79_021789 Vim Vim Skil Skil Fgfr3 Fgfr3 Nf2 Nf2 Bfsp2 Bfsp2 Kdm5b Kdm5b Smarca4 Smarca4 Smad3 Smad3 I79_007529 I79_007529 I79_024271 I79_024271 Fgfr2 Fgfr2 Ntrk3 Ntrk3 Fzr1 Fzr1 Tgfb1 Tgfb1 I79_014458 I79_014458 I79_014460 I79_014460 I79_015873 I79_015873 Frs2 Frs2 Plaat1 Plaat1 Epha2 Epha2 I79_003013 I79_003013 Prox1 Prox1 I79_020027 I79_020027
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Atf4Cyclic AMP-dependent transcription factor ATF-4. (348 aa)
I79_021789NT-3 growth factor receptor. (389 aa)
VimVimentin; Belongs to the intermediate filament family. (466 aa)
SkilSki-like protein. (677 aa)
Fgfr3Fibroblast growth factor receptor 3. (319 aa)
Nf2Merlin-like protein. (596 aa)
Bfsp2Phakinin; Belongs to the intermediate filament family. (416 aa)
Kdm5bLysine-specific demethylase 5B. (748 aa)
Smarca4Putative global transcription activator SNF2L4. (1614 aa)
Smad3Mothers against decapentaplegic homolog. (363 aa)
I79_007529Cystine/glutamate transporter. (437 aa)
I79_024271NT-3 growth factor receptor. (114 aa)
Fgfr2Fibroblast growth factor receptor 2. (659 aa)
Ntrk3Tyrosine-protein kinase receptor. (226 aa)
Fzr1Fizzy-related protein-like. (493 aa)
Tgfb1Transforming growth factor beta-1. (237 aa)
I79_014458Gamma-crystallin B; Belongs to the beta/gamma-crystallin family. (175 aa)
I79_014460Gamma-crystallin D; Belongs to the beta/gamma-crystallin family. (145 aa)
I79_015873Pituitary homeobox 3. (214 aa)
Frs2Fibroblast growth factor receptor substrate 2. (509 aa)
Plaat1HRAS-like suppressor. (167 aa)
Epha2Ephrin type-A receptor 2. (942 aa)
I79_003013Abl interactor 2. (382 aa)
Prox1Prospero homeobox protein 1. (738 aa)
I79_020027TBC1 domain family member 20. (555 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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