STRINGSTRING
I79_024304 I79_024304 Taf3 Taf3 Gtf2a2 Gtf2a2 I79_000274 I79_000274 Taf4 Taf4 Med30 Med30 Brf2 Brf2 Taf12 Taf12 MED18 MED18 H671_5g13732 H671_5g13732 I79_005272 I79_005272 Smarca4 Smarca4 Gtf2f2 Gtf2f2 Dr1 Dr1 MED8 MED8 Rrn3 Rrn3 I79_010560 I79_010560 I79_011588 I79_011588 Polr1e Polr1e Taf8 Taf8 Baz2a Baz2a Taf11 Taf11 Smarcb1 Smarcb1 Taf7 Taf7 I79_016664 I79_016664 Taf1b Taf1b I79_018037 I79_018037 Gtf2b Gtf2b Taf6 Taf6 I79_020821 I79_020821 Taf13 Taf13 Taf10 Taf10 I79_022457 I79_022457 I79_022459 I79_022459 I79_022460 I79_022460 I79_025003 I79_025003 I79_025229 I79_025229
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_024304Protein Dr1. (319 aa)
Taf3Transcription initiation factor TFIID subunit 3. (930 aa)
Gtf2a2Transcription initiation factor IIA subunit 2. (63 aa)
I79_000274TATA box-binding protein-associated factor, RNA polymerase I, subunit C. (848 aa)
Taf4Transcription initiation factor TFIID subunit 4. (630 aa)
Med30Mediator of RNA polymerase II transcription subunit 30. (73 aa)
Brf2Transcription factor IIIB 50 kDa subunit. (416 aa)
Taf12Transcription initiation factor TFIID subunit 12. (161 aa)
MED18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (208 aa)
H671_5g13732Transcription factor TFIIB containing protein. (416 aa)
I79_005272Transcription initiation factor TFIID subunit 7-like. (384 aa)
Smarca4Putative global transcription activator SNF2L4. (1614 aa)
Gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
Dr1Protein Dr1. (176 aa)
MED8Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (268 aa)
Rrn3RNA polymerase I-specific transcription initiation factor RRN3. (224 aa)
I79_010560Transcription factor TFIIIB component B''-like. (2228 aa)
I79_011588Nucleolar transcription factor 1. (727 aa)
Polr1eDNA-directed RNA polymerase I subunit RPA49. (434 aa)
Taf8Transcription initiation factor TFIID subunit 8. (308 aa)
Baz2aBromodomain adjacent to zinc finger domain protein 2A. (1874 aa)
Taf11Transcription initiation factor TFIID subunit 11. (106 aa)
Smarcb1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. (348 aa)
Taf7Transcription initiation factor TFIID subunit 7. (341 aa)
I79_016664PIH1 domain-containing protein 1. (280 aa)
Taf1bTATA box-binding protein-associated factor RNA polymerase I subunit B. (258 aa)
I79_018037RNA polymerase I-specific transcription initiation factor RRN3. (202 aa)
Gtf2bTranscription initiation factor IIB. (285 aa)
Taf6Transcription initiation factor TFIID subunit 6. (678 aa)
I79_020821Transcription initiation factor TFIID subunit 5. (416 aa)
Taf13Transcription initiation factor TFIID subunit 13-like protein. (124 aa)
Taf10Transcription initiation factor TFIID subunit 10. (125 aa)
I79_022457Transcription initiation factor TFIID subunit 2. (89 aa)
I79_022459Transcription initiation factor TFIID subunit 2. (62 aa)
I79_022460Transcription initiation factor TFIID subunit 2. (125 aa)
I79_025003Upstream-binding factor 1-like protein 1. (349 aa)
I79_025229Upstream-binding factor 1-like protein 1. (329 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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