STRINGSTRING
I79_008941 I79_008941 I79_000054 I79_000054 I79_000233 I79_000233 Slc7a5 Slc7a5 I79_000687 I79_000687 I79_001764 I79_001764 Grin2a Grin2a Optn Optn Socs1 Socs1 Rptor Rptor Baiap2 Baiap2 Col1a2 Col1a2 Sesn1 Sesn1 Mmp2 Mmp2 I79_003782 I79_003782 Col16a1 Col16a1 Sesn2 Sesn2 CgPICR_003913 CgPICR_003913 Bcl11a Bcl11a Glra1 Glra1 Dnmt1 Dnmt1 I79_005895 I79_005895 Sesn3 Sesn3 I79_006834 I79_006834 Cpeb4 Cpeb4 Bcl2l1 Bcl2l1 I79_009065 I79_009065 Lamtor2 Lamtor2 Glra2 Glra2 Lars1 Lars1 I79_010044 I79_010044 Slc38a9 Slc38a9 I79_010330 I79_010330 Gclc Gclc Atp5mc1 Atp5mc1 Col1a1 Col1a1 Rragc Rragc Cdh1 Cdh1 H671_2g6475 H671_2g6475 Fyn Fyn Zeb1 Zeb1 I79_012199 I79_012199 Atp7a Atp7a Xbp1 Xbp1 Hmgcs2 Hmgcs2 Ubr2 Ubr2 Bcl2l2 Bcl2l2 I79_015356 I79_015356 Rragb Rragb I79_016007 I79_016007 Pdgfd Pdgfd Tnf Tnf Glra3 Glra3 I79_016677 I79_016677 Castor1 Castor1 I79_018703 I79_018703 Nsmf Nsmf Hnrnpd Hnrnpd Amigo1 Amigo1 Col4a1 Col4a1 Ntrk2 Ntrk2 I79_019797 I79_019797 I79_021217 I79_021217 Cpeb1 Cpeb1 Six1 Six1 I79_022055 I79_022055 Mtor Mtor I79_022778 I79_022778 I79_023283 I79_023283 Sh3bp4 Sh3bp4 H671_3g8566 H671_3g8566 I79_024376 I79_024376 I79_024377 I79_024377 Pdgfra Pdgfra I79_024850 I79_024850 Col3a1 Col3a1 Ass1 Ass1 CgPICR_003973 CgPICR_003973
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_008941Receptor protein-tyrosine kinase. (962 aa)
I79_000054Calpain-2 catalytic subunit; Belongs to the peptidase C2 family. (668 aa)
I79_000233Cytochrome b-245 light chain. (206 aa)
Slc7a5Large neutral amino acids transporter small subunit 1. (506 aa)
I79_000687Ras-related GTP-binding protein D. (296 aa)
I79_001764Glutamate [NMDA] receptor subunit epsilon-1. (147 aa)
Grin2aGlutamate [NMDA] receptor subunit epsilon-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1307 aa)
OptnOptineurin. (623 aa)
Socs1Suppressor of cytokine signaling 1. (93 aa)
RptorRegulatory-associated protein of mTOR. (1331 aa)
Baiap2Brain-specific angiogenesis inhibitor 1-associated protein 2. (555 aa)
Col1a2Collagen alpha-2(I) chain. (621 aa)
Sesn1Sestrin-1. (551 aa)
Mmp272 kDa type IV collagenase. (662 aa)
I79_003782E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1247 aa)
Col16a1Collagen alpha-1(XVI) chain. (1611 aa)
Sesn2Sestrin-2. (480 aa)
CgPICR_003913Heterogeneous nuclear ribonucleoprotein A/B. (211 aa)
Bcl11aB-cell lymphoma/leukemia 11A. (749 aa)
Glra1Glycine receptor subunit alpha-1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (413 aa)
Dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1494 aa)
I79_005895DNA (Cytosine-5)-methyltransferase 1. (85 aa)
Sesn3Sestrin-3. (414 aa)
I79_006834Collagen alpha-1(VI) chain. (822 aa)
Cpeb4Cytoplasmic polyadenylation element-binding protein 4. (339 aa)
Bcl2l1Bcl-2-like protein 1. (233 aa)
I79_009065Kelch-like protein 22. (399 aa)
Lamtor2Mitogen-activated protein-binding protein-interacting protein. (125 aa)
Glra2Glycine receptor subunit alpha-2. (161 aa)
Lars1Leucyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. (727 aa)
I79_010044Leucyl-tRNA synthetase, cytoplasmic. (438 aa)
Slc38a9Putative sodium-coupled neutral amino acid transporter 9. (362 aa)
I79_010330Hepatocyte nuclear factor 1-alpha. (668 aa)
GclcGlutamate--cysteine ligase catalytic subunit. (584 aa)
Atp5mc1ATP synthase lipid-binding protein, mitochondrial; Belongs to the ATPase C chain family. (136 aa)
Col1a1Collagen alpha-1(I) chain. (355 aa)
RragcRas-related GTP-binding protein C. (177 aa)
Cdh1Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins. (744 aa)
H671_2g6475ATP synthase lipid-binding protein, mitochondrial; Belongs to the ATPase C chain family. (136 aa)
FynProto-oncogene tyrosine-protein kinase Fyn. (232 aa)
Zeb1Zinc finger E-box-binding homeobox 1. (1078 aa)
I79_012199Ras-related GTP-binding protein C. (130 aa)
Atp7aCopper-transporting ATPase 1. (1457 aa)
Xbp1X-box binding protein 1 isoform 1. (330 aa)
Hmgcs23-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (508 aa)
Ubr2E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1755 aa)
Bcl2l2Bcl-2-like protein 2. (193 aa)
I79_015356Heat shock factor protein 1. (524 aa)
RragbRas-related GTP-binding protein B-like protein. (346 aa)
I79_016007Cytochrome b-245 heavy chain. (396 aa)
PdgfdPlatelet-derived growth factor D. (253 aa)
TnfTumor necrosis factor; Belongs to the tumor necrosis factor family. (234 aa)
Glra3Glycine receptor subunit alpha-3. (197 aa)
I79_016677Glycine receptor subunit alpha-3. (147 aa)
Castor1GATS-like protein 3. (332 aa)
I79_018703UPF0539 protein C7orf59-like. (99 aa)
NsmfNasal embryonic luteinizing hormone-releasing hormone factor. (530 aa)
HnrnpdHeterogeneous nuclear ribonucleoprotein D0. (257 aa)
Amigo1Amphoterin-induced protein 1. (493 aa)
Col4a1Collagen alpha-1(IV) chain. (1614 aa)
Ntrk2Tyrosine-protein kinase receptor. (383 aa)
I79_019797BDNF/NT-3 growth factors receptor. (192 aa)
I79_021217Collagen alpha-6(IV) chain. (123 aa)
Cpeb1Cytoplasmic polyadenylation element-binding protein 1. (481 aa)
Six1Homeobox protein SIX1. (284 aa)
I79_022055Argininosuccinate synthase. (97 aa)
MtorSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2520 aa)
I79_022778Glutamate--cysteine ligase regulatory subunit. (225 aa)
I79_023283Ras-related GTP-binding protein A. (291 aa)
Sh3bp4SH3 domain-binding protein 4. (961 aa)
H671_3g8566Ragulator complex protein LAMTOR1-like protein. (236 aa)
I79_024376Collagen alpha-2(V) chain. (170 aa)
I79_024377Collagen alpha-2(V) chain. (935 aa)
PdgfraPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1082 aa)
I79_024850Patatin-like phospholipase domain-containing protein 3. (273 aa)
Col3a1Collagen alpha-1(III) chain. (1051 aa)
Ass1Argininosuccinate synthase. (242 aa)
CgPICR_003973Hepatitis B virus X-interacting protein-like. (133 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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