STRINGSTRING
I79_000439 I79_000439 Cldn1 Cldn1 CgPICR_003438 CgPICR_003438 Src Src Edn1 Edn1 Ptafr Ptafr Xrcc5 Xrcc5 I79_005332 I79_005332 Lpl Lpl Adipor2 Adipor2 E2f1 E2f1 Zc3h12a Zc3h12a Ranbp1 Ranbp1 I79_010155 I79_010155 Id3 Id3 Hmgcs2 Hmgcs2 CgPICR_018825 CgPICR_018825 Pdk3 Pdk3 I79_014111 I79_014111 Pdk4 Pdk4 Dgat2 Dgat2 I79_015046 I79_015046 I79_015205 I79_015205 I79_015503 I79_015503 Smarcd1 Smarcd1 Znf683 Znf683 I79_018654 I79_018654 Slc2a2 Slc2a2 I79_020576 I79_020576 Irs1 Irs1 I79_022055 I79_022055 I79_022371 I79_022371 H671_3g10186 H671_3g10186 Ass1 Ass1 Pid1 Pid1 Cpt1a Cpt1a LDLR LDLR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_000439Phosphoinositide phospholipase C. (949 aa)
Cldn1Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
CgPICR_003438C-C motif chemokine. (143 aa)
SrcTyrosine-protein kinase. (536 aa)
Edn1Endothelin-1. (202 aa)
PtafrPlatelet-activating factor receptor; Belongs to the G-protein coupled receptor 1 family. (341 aa)
Xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (732 aa)
I79_005332Carbamoyl-phosphate synthase [ammonia], mitochondrial. (1309 aa)
LplLipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (450 aa)
Adipor2Adiponectin receptor protein 2. (386 aa)
E2f1Transcription factor E2F1. (367 aa)
Zc3h12aRibonuclease ZC3H12A. (577 aa)
Ranbp1Ran-specific GTPase-activating protein. (220 aa)
I79_010155Sterol regulatory element-binding protein 1. (1050 aa)
Id3DNA-binding protein inhibitor ID-3. (119 aa)
Hmgcs23-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (508 aa)
CgPICR_018825Cell division protein kinase 4. (121 aa)
Pdk3Protein-serine/threonine kinase. (415 aa)
I79_014111Protein-serine/threonine kinase. (60 aa)
Pdk4Protein-serine/threonine kinase. (178 aa)
Dgat2Diacylglycerol O-acyltransferase 2. (388 aa)
I79_015046Low-density lipoprotein receptor. (160 aa)
I79_015205Cell division protein kinase 4; Belongs to the protein kinase superfamily. (367 aa)
I79_015503Transcription factor HES-1. (92 aa)
Smarcd1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1. (453 aa)
Znf683Zinc finger protein 683. (424 aa)
I79_018654Carnitine O-palmitoyltransferase 1, liver isoform. (467 aa)
Slc2a2Solute carrier family 2, facilitated glucose transporter member 2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (351 aa)
I79_020576Mitochondrial brown fat uncoupling protein 1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (267 aa)
Irs1Insulin receptor substrate 1. (1233 aa)
I79_022055Argininosuccinate synthase. (97 aa)
I79_022371Cell division protein kinase 4. (143 aa)
H671_3g10186Olfactory receptor. (320 aa)
Ass1Argininosuccinate synthase. (242 aa)
Pid1PTB-containing, cubilin and LRP1-interacting protein. (159 aa)
Cpt1aCarnitine O-palmitoyltransferase 1, liver isoform. (127 aa)
LDLRLow-density lipoprotein receptor; Binds LDL, the major cholesterol-carrying lipoprotein of plasma, and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits; Belongs to the LDLR family. (862 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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