(24 nodes) Glomerular epithelium development network (Cricetulus griseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Asxl1	Putative Polycomb group protein ASXL1. (1470 aa)
	I79_010290	Endothelin B receptor; Belongs to the G-protein coupled receptor 1 family. (361 aa)
	Magi2	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2. (483 aa)
	I79_011515	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2. (343 aa)
	Podxl	Podocalyxin-like protein 1. (387 aa)
	I79_012418	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2. (120 aa)
	Notch2	Neurogenic locus notch-like protein 2. (1521 aa)
	I79_012794	Nephrin. (1049 aa)
	Foxj1	Forkhead box protein J1. (421 aa)
	I79_015223	Neurogenic locus notch-like protein 2. (248 aa)
	Pdgfb	Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (205 aa)
	Ampd2	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. (798 aa)
	I79_019507	Prominin-1. (565 aa)
	Lamb2	Laminin subunit beta-2. (1800 aa)
	Cd34	Hematopoietic progenitor cell antigen CD34. (383 aa)
	I79_000180	Myosin-Ie; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1021 aa)
	Klf15	Krueppel-like factor 15. (414 aa)
	Jag1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1186 aa)
	I79_006254	Bone morphogenetic protein 4. (406 aa)
	Nphs2	Podocin. (392 aa)
	Ednra	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family. (412 aa)
	I79_007229	Receptor-type tyrosine-protein phosphatase O. (1056 aa)
	Ext1	Exostosin-1. (388 aa)
	I79_008304	Platelet endothelial cell adhesion molecule. (596 aa)

Your Current Organism:

Cricetulus griseus

NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cd34	I79_006254	G3ID98	G3H7C4	Hematopoietic progenitor cell antigen CD34.	Bone morphogenetic protein 4.	0.461
Cd34	I79_008304	G3ID98	G3HCT8	Hematopoietic progenitor cell antigen CD34.	Platelet endothelial cell adhesion molecule.	0.691
Cd34	I79_019507	G3ID98	G3I7L4	Hematopoietic progenitor cell antigen CD34.	Prominin-1.	0.572
Cd34	Podxl	G3ID98	G3HN97	Hematopoietic progenitor cell antigen CD34.	Podocalyxin-like protein 1.	0.587
Ednra	I79_010290	G3H9A8	G3HI25	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.	Endothelin B receptor; Belongs to the G-protein coupled receptor 1 family.	0.769
I79_006254	Cd34	G3H7C4	G3ID98	Bone morphogenetic protein 4.	Hematopoietic progenitor cell antigen CD34.	0.461
I79_008304	Cd34	G3HCT8	G3ID98	Platelet endothelial cell adhesion molecule.	Hematopoietic progenitor cell antigen CD34.	0.691
I79_008304	I79_019507	G3HCT8	G3I7L4	Platelet endothelial cell adhesion molecule.	Prominin-1.	0.550
I79_010290	Ednra	G3HI25	G3H9A8	Endothelin B receptor; Belongs to the G-protein coupled receptor 1 family.	Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.	0.769
I79_011515	I79_012418	G3HLC7	G3HNS4	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	0.896
I79_012418	I79_011515	G3HNS4	G3HLC7	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	0.896
I79_012418	Magi2	G3HNS4	G3HLC6	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	0.763
I79_012794	Nphs2	G3HPS5	G3H7J6	Nephrin.	Podocin.	0.971
I79_012794	Podxl	G3HPS5	G3HN97	Nephrin.	Podocalyxin-like protein 1.	0.589
I79_015223	Jag1	G3HW73	G3GSA7	Neurogenic locus notch-like protein 2.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.899
I79_019507	Cd34	G3I7L4	G3ID98	Prominin-1.	Hematopoietic progenitor cell antigen CD34.	0.572
I79_019507	I79_008304	G3I7L4	G3HCT8	Prominin-1.	Platelet endothelial cell adhesion molecule.	0.550
Jag1	I79_015223	G3GSA7	G3HW73	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Neurogenic locus notch-like protein 2.	0.899
Jag1	Notch2	G3GSA7	G3HP78	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	Neurogenic locus notch-like protein 2.	0.981
Magi2	I79_012418	G3HLC6	G3HNS4	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.	0.763