STRINGSTRING
I79_011804 I79_011804 Kirrel3 Kirrel3 Mef2c Mef2c I79_006254 I79_006254 I79_025974 I79_025974 Mtss1 Mtss1 Pdgfra Pdgfra Tcf21 Tcf21 I79_015223 I79_015223 Ahr Ahr Pdgfrb Pdgfrb I79_013660 I79_013660 Ctnnd1 Ctnnd1 Notch2 Notch2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I79_011804Neurogenic locus notch-like protein 3. (2181 aa)
Kirrel3Kin of IRRE-like protein 3. (753 aa)
Mef2cMyocyte-specific enhancer factor 2C. (465 aa)
I79_006254Bone morphogenetic protein 4. (406 aa)
I79_025974Metastasis suppressor protein 1. (73 aa)
Mtss1Metastasis suppressor protein 1. (526 aa)
PdgfraPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1082 aa)
Tcf21Transcription factor 21. (179 aa)
I79_015223Neurogenic locus notch-like protein 2. (248 aa)
AhrAryl hydrocarbon receptor. (247 aa)
PdgfrbBeta-type platelet-derived growth factor receptor. (528 aa)
I79_013660Beta-type platelet-derived growth factor receptor. (454 aa)
Ctnnd1Catenin delta-1. (932 aa)
Notch2Neurogenic locus notch-like protein 2. (1521 aa)
Your Current Organism:
Cricetulus griseus
NCBI taxonomy Id: 10029
Other names: C. griseus, CHO cell lines, Chinese hamster, Chinese hamsters, Cricetulus aureus, Cricetulus barabensis griseus
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